RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ELP3Q9H9T3 547 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 ADARB2Q9NS39 739 aaKnown RBP23.6■■□□□ 1.37
PNKP-201ENST00000322344 DNPEPQ9ULA0 475 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 AGTPBP1Q9UPW5 1226 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 TNFSF13BQ9Y275 285 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 EFR3BQ9Y2G0 817 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 ACTL7BQ9Y614 415 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 DNAJC25-GNG10A0A024R161 153 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 INO80B-WBP1J3KQ70 363 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 TCF4P15884 667 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 KCTD2Q14681 263 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 TMEM132AQ24JP5 1023 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 ANKRD20A8PQ5CZ79 823 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 CCDC125Q86Z20 511 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 CCDC13Q8IYE1 715 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 DYDC1Q8WWB3 177 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 NKD2Q969F2 451 aaPredicted RBP23.6■■□□□ 1.37
PNKP-201ENST00000322344 TTC25Q96NG3 672 aa23.6■■□□□ 1.37
PNKP-201ENST00000322344 INO80BQ9C086 356 aaPredicted RBP23.6■■□□□ 1.37
PNKP-201ENST00000322344 RPF1Q9H9Y2 349 aaKnown RBP23.6■■□□□ 1.37
PNKP-201ENST00000322344 TMEM120BA0PK00 339 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 PGK2P07205 417 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 VIMP08670 466 aaKnown RBP23.59■■□□□ 1.37
PNKP-201ENST00000322344 MAGEA4P43358 317 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 VCPP55072 806 aaKnown RBP23.59■■□□□ 1.37
PNKP-201ENST00000322344 CCDC62Q6P9F0 684 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 SCARA5Q6ZMJ2 495 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 OTUD5Q96G74 571 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 NLRP4Q96MN2 994 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 CFAP57Q96MR6 1250 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 RBM15Q96T37 977 aaKnown RBP eCLIP23.59■■□□□ 1.377e-9■■■□□ 16.1
PNKP-201ENST00000322344 MMP19Q99542 508 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 NFKBIZQ9BYH8 718 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 FRMD8P1Q9BZ68 369 aaPredicted RBP23.59■■□□□ 1.37
PNKP-201ENST00000322344 OTOFQ9HC10 1997 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 CDKN2BP42772 138 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 GSCP56915 257 aaPredicted RBP23.59■■□□□ 1.37
PNKP-201ENST00000322344 ZNF667Q5HYK9 610 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 VSTM1Q6UX27 236 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 FNIP1Q8TF40 1166 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 CCT6BQ92526 530 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 BCO2Q9BYV7 579 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 CDT1Q9H211 546 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 WDR35Q9P2L0 1181 aa23.59■■□□□ 1.37
PNKP-201ENST00000322344 TPX2Q9ULW0 747 aaKnown RBP23.59■■□□□ 1.37
PNKP-201ENST00000322344 SIGLEC16A6NMB1 481 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 ITGAVP06756 1048 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 MBTD1Q05BQ5 628 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 MORF4L2Q15014 288 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 OASLQ15646 514 aaKnown RBP23.58■■□□□ 1.37
PNKP-201ENST00000322344 FBXW10Q5XX13 1052 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 DENND1BQ6P3S1 775 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 PWWP2AQ96N64 755 aa23.58■■□□□ 1.37
PNKP-201ENST00000322344 PRMT7Q9NVM4 692 aaPredicted RBP23.58■■□□□ 1.37
PNKP-201ENST00000322344 LRRD1A4D1F6 860 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 SPDYE5A6NIY4 337 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 CCT8L1PA6NM43 557 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 ADM5C9JUS6 153 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 KRT7P08729 469 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 CD19P15391 556 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 IFNAR2P48551 515 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 ARSEP51690 589 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 POU5F1BQ06416 359 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 EEF1DP3Q658K8 133 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 EFCAB12Q6NXP0 572 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 NXF1Q9UBU9 619 aaKnown RBP23.57■■□□□ 1.36
PNKP-201ENST00000322344 KCNH4Q9UQ05 1017 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 PSMA2P25787 234 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 TNFAIP2Q03169 654 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 HADHQ16836 314 aaKnown RBP23.57■■□□□ 1.36
PNKP-201ENST00000322344 CYP4A22Q5TCH4 519 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 SUGP1Q8IWZ8 645 aaKnown RBP23.57■■□□□ 1.36
PNKP-201ENST00000322344 ANKRD13AQ8IZ07 590 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 NLGN2Q8NFZ4 835 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 C9orf72Q96LT7 481 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 FHDC1Q9C0D6 1143 aaPredicted RBP23.57■■□□□ 1.36
PNKP-201ENST00000322344 MROH8Q9H579 483 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 PCDH9Q9HC56 1237 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 RBPJLQ9UBG7 517 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 POLIQ9UNA4 740 aa23.57■■□□□ 1.36
PNKP-201ENST00000322344 DICER1Q9UPY3 1922 aaKnown RBP23.57■■□□□ 1.36
PNKP-201ENST00000322344 KRT3P12035 628 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 BRAFP15056 766 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 OSBPP22059 807 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 OSTNP61366 133 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 NR1H3Q13133 447 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 PTPN20Q4JDL3 420 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 DLK2Q6UY11 383 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 FBXO16Q8IX29 292 aaPredicted RBP23.56■■□□□ 1.36
PNKP-201ENST00000322344 KCNK9Q9NPC2 374 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 CTNNAL1Q9UBT7 734 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 NAALADL1Q9UQQ1 740 aa23.56■■□□□ 1.36
PNKP-201ENST00000322344 POLR2AP24928 1970 aaKnown RBP23.55■■□□□ 1.36
PNKP-201ENST00000322344 B4GALT5O43286 388 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 KRT19P08727 400 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 TXNP10599 105 aaKnown RBP23.55■■□□□ 1.36
PNKP-201ENST00000322344 HNRNPH1P31943 449 aaKnown RBP23.55■■□□□ 1.36
PNKP-201ENST00000322344 PHKA2P46019 1235 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 TTLL4Q14679 1199 aa23.55■■□□□ 1.36
PNKP-201ENST00000322344 FAM187BQ17R55 369 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms