RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 CCHCR1Q8TD31 782 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 KREMEN1Q96MU8 473 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 GAD1Q99259 594 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 PJA2O43164 708 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 INHBAP08476 426 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 PRKAR2AP13861 404 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ARL2P36404 184 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SULT1E1P49888 294 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 EIF3EP60228 445 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 MAP3K10Q02779 954 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 DHX34Q14147 1143 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 HGSNATQ68CP4 663 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CENPUQ71F23 418 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SPATA2LQ8IUW3 424 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 C12orf56Q8IXR9 622 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 FAM71AQ8IYT1 594 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 HDAC7Q8WUI4 952 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SREK1Q8WXA9 508 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CFAP36Q96G28 342 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CABS1Q96KC9 395 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 MFSD14AQ96MC6 490 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 TTYH3Q9C0H2 523 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 TRIM17Q9Y577 477 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 PDE2AO00408 941 aaPredicted RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 RGS20O76081 388 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ACO1P21399 889 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 PNPLA4P41247 253 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 PMS2P54278 862 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 CCL14Q16627 93 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 EFHC2Q5JST6 749 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 ADAM33Q9BZ11 813 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 INTS9Q9NV88 658 aaKnown RBP9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 SLC12A6Q9UHW9 1150 aa9.79□□□□□ -0.84
TMEM39A-201ENST00000319172 MROH7Q68CQ1 1323 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ADGRA3Q8IWK6 1321 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 TIAM2Q8IVF5 1701 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 MAPK13O15264 365 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 NR1D1P20393 614 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 GPD1P21695 349 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 HOXD13P35453 343 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 NOGQ13253 232 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ZSCAN26Q16670 478 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 BTBD8Q5XKL5 378 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ADGRF2Q8IZF7 708 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 OR2W6PQ8NHA6 318 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 KLHL8Q9P2G9 620 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 TSPAN16Q9UKR8 245 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 A0A0A6YYK5 440 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 EDIL3O43854 480 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 PRLRP16471 622 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 PCSK1P29120 753 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 PTGISQ16647 500 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 PALB2Q86YC2 1186 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 CRYGNQ8WXF5 182 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 KRT35Q92764 455 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 DMAC2Q9NW81 257 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 GPATCH2LQ9NWQ4 482 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ADAM21Q9UKJ8 722 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 TRAPPC3O43617 180 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 CST3P01034 146 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 SLC4A1P02730 911 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 FAM200BP0CF97 657 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 SRGAP2BP0DMP2 458 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ZNF200P98182 395 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 BIRC2Q13490 618 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ZKSCAN8Q15776 578 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 LLGL2Q6P1M3 1020 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 CCDC33Q8N5R6 958 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 L3MBTL3Q96JM7 780 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 CFAP57Q96MR6 1250 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 TRIM7Q9C029 511 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ST6GALNAC4Q9H4F1 302 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 ITGA11Q9UKX5 1188 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 BARX2Q9UMQ3 279 aaPredicted RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 FNDC3AQ9Y2H6 1198 aaKnown RBP9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 CDY2AQ9Y6F7 541 aa9.78□□□□□ -0.84
TMEM39A-201ENST00000319172 TREHO43280 583 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 KPNA6O60684 536 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 PROSCO94903 275 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 FMO1Q01740 532 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 ROR1Q01973 937 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 AP1B1Q10567 949 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 NT5DC3Q86UY8 548 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 CREG2Q8IUH2 290 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 C9orf72Q96LT7 481 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 NCAPGQ9BPX3 1015 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 CYP3A43Q9HB55 503 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 KCND1Q9NSA2 647 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 ABI2Q9NYB9 513 aaPredicted RBP9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 LCMT1Q9UIC8 334 aa9.77□□□□□ -0.84
TMEM39A-201ENST00000319172 TMEM88BA6NKF7 163 aa9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 AP1G2O75843 785 aa9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 ATICP31939 592 aa9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 MSH2P43246 934 aa9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 PDCLQ13371 301 aa9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 DAB2IPQ5VWQ8 1189 aa9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 HEATR6Q6AI08 1181 aaKnown RBP9.77□□□□□ -0.85
TMEM39A-201ENST00000319172 AADACL2Q6P093 401 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms