RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 SNX25Q9H3E2 840 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 MRPL17Q9NRX2 175 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 DDX43Q9NXZ2 648 aaKnown RBP13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 CEP72Q9P209 647 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 FNIP2Q9P278 1114 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 HMGXB4Q9UGU5 601 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 CHD7Q9P2D1 2997 aa13.51□□□□□ -0.25
CHMP2A-201ENST00000312547 NLRC5Q86WI3 1866 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 A0A1W2PQJ5 194 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 C2orf71A6NGG8 1288 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 OR6C75A6NL08 312 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 ADAM12O43184 909 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 ADCY5O95622 1261 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 CXCL14O95715 111 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 CD58P19256 250 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 TRIM21P19474 475 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 PCSK1P29120 753 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 RAD23BP54727 409 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 SMC1AQ14683 1233 aaKnown RBP13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 DRAP1Q14919 205 aaPredicted RBP13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 GRIN2CQ14957 1233 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 ARHGAP44Q17R89 818 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 FAM71AQ8IYT1 594 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 THEM5Q8N1Q8 247 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 BAP1Q92560 729 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 NUP58Q9BVL2 599 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 ELOVL4Q9GZR5 314 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 ZCWPW1Q9H0M4 648 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 ENTPD7Q9NQZ7 604 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 CDH9Q9ULB4 789 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 PCDHGC5Q9Y5F6 944 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 TSC2P49815 1807 aa13.5□□□□□ -0.25
CHMP2A-201ENST00000312547 HIDE1A8MVS5 230 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 A8MXQ7 604 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 F8VZ95 297 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 FOXN3O00409 490 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 C2CD2LO14523 706 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 TEX28O15482 410 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 GYPCP04921 128 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 CNPP09543 421 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 ACAT1P24752 427 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 MRE11P49959 708 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 CREMQ03060 361 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 BMS1Q14692 1282 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 ZNF697Q5TEC3 545 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 PLPP4Q5VZY2 271 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 TMEM270Q6UE05 265 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 LRRTM3Q86VH5 581 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 SLC4A11Q8NBS3 891 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 MRPL38Q96DV4 380 aaKnown RBP13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 TMEM209Q96SK2 561 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 SYT15Q9BQS2 421 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 NT5C1AQ9BXI3 368 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 DPEP3Q9H4B8 488 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 NLRC4Q9NPP4 1024 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 CRTAC1Q9NQ79 661 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 MYO6Q9UM54 1294 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 CAPN11Q9UMQ6 739 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 PCDHB4Q9Y5E5 795 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.49□□□□□ -0.254e-9■■■□□ 16
CHMP2A-201ENST00000312547 VWA8A3KMH1 1905 aa13.49□□□□□ -0.25
CHMP2A-201ENST00000312547 PLXNA4Q9HCM2 1894 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 MYBPHLA2RUH7 354 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 ATP2C2O75185 946 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 PAEPP09466 180 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 PDGFRBP09619 1106 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 PTPN1P18031 435 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 RPL17P18621 184 aaKnown RBP13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 POU3F3P20264 500 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 CDC25BP30305 580 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 NDUFV1P49821 464 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 ORC1Q13415 861 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 RAPGEF1Q13905 1077 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 RAB33AQ14088 237 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 TRIM14Q14142 442 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 PTPROQ16827 1216 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 CCDC142Q17RM4 750 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 RBBP8NLQ8NC74 664 aaPredicted RBP13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 B3GALNT2Q8NCR0 500 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 MICAL1Q8TDZ2 1067 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 TMEM176AQ96HP8 235 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 TNIP3Q96KP6 325 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 KLHL5Q96PQ7 755 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 PRDM12Q9H4Q4 367 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 LMCD1Q9NZU5 365 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 CDY1Q9Y6F8 540 aa13.48□□□□□ -0.25
CHMP2A-201ENST00000312547 ABLIM3O94929 683 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 C1RP00736 705 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 OR4Q2P0C623 313 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 OR1D2P34982 312 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 CLCN1P35523 988 aa13.47□□□□□ -0.25
CHMP2A-201ENST00000312547 SOX5P35711 763 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms