RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 CLDN5O00501 218 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 PSMA7O14818 248 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 CETN3O15182 167 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 HUS1O60921 280 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 CALCAP01258 141 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 SRGAP2BP0DMP2 458 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 FKBP3Q00688 224 aaKnown RBP12.91□□□□□ -0.34
SCFD1-201ENST00000311943 LRMPQ12912 555 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 SURF1Q15526 300 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 DDR2Q16832 855 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 LIMS2Q7Z4I7 341 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 IRF2BP1Q8IU81 584 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 GPR65Q8IYL9 337 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 CORO1BQ9BR76 489 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 ZNF334Q9HCZ1 680 aaPredicted RBP12.91□□□□□ -0.34
SCFD1-201ENST00000311943 YIPF1Q9Y548 306 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 DENND4AQ7Z401 1863 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 LOC730098B7Z3J9 87 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 ZNF699Q32M78 642 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 DHTKD1Q96HY7 919 aaPredicted RBP12.91□□□□□ -0.34
SCFD1-201ENST00000311943 ZSWIM3Q96MP5 696 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 WDR6Q9NNW5 1121 aaKnown RBP12.91□□□□□ -0.34
SCFD1-201ENST00000311943 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
SCFD1-201ENST00000311943 DOCK8Q8NF50 2099 aa12.91□□□□□ -0.34
SCFD1-201ENST00000311943 MOSPD3O75425 235 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 KIF20AO95235 890 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 RPL13P26373 211 aaKnown RBP12.9□□□□□ -0.34
SCFD1-201ENST00000311943 ELF1P32519 619 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 PNPLA4P41247 253 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 PIK3CAP42336 1068 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 ASPAP45381 313 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 MYO1EQ12965 1108 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 PAK1Q13153 545 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 MYBPC2Q14324 1141 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 IER5LQ5T953 404 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 C11orf57Q6ZUT1 292 aaPredicted RBP12.9□□□□□ -0.34
SCFD1-201ENST00000311943 INTS8Q75QN2 995 aaKnown RBP12.9□□□□□ -0.34
SCFD1-201ENST00000311943 TCEAL8Q8IYN2 117 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 KAT5Q92993 513 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 NCANO14594 1321 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 CLUHO75153 1309 aa12.9□□□□□ -0.34
SCFD1-201ENST00000311943 TNFRSF10AO00220 468 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 ASS1P00966 412 aaKnown RBP12.89□□□□□ -0.35
SCFD1-201ENST00000311943 RHOP08100 348 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 EPB41P11171 864 aaKnown RBP12.89□□□□□ -0.35
SCFD1-201ENST00000311943 KRT13P13646 458 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 CD58P19256 250 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 GBP2P32456 591 aaPredicted RBP12.89□□□□□ -0.35
SCFD1-201ENST00000311943 CREMQ03060 361 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 ZNF394Q53GI3 561 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 INTS6LQ5JSJ4 861 aaKnown RBP12.89□□□□□ -0.35
SCFD1-201ENST00000311943 PDXDC1Q6P996 788 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 METTL23Q86XA0 190 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 TOP6BLQ8N6T0 577 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 C12orf29Q8N999 325 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 TSG101Q99816 390 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 ZDHHC7Q9NXF8 308 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 OR6C75A6NL08 312 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 CEBPBP17676 345 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 TNNC1P63316 161 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 LRRC63Q05C16 580 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 ACOT1Q86TX2 421 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 FGF13Q92913 245 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 MYLPFQ96A32 169 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 PCED1BQ96HM7 432 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 RIPOR3Q96MK2 946 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 SYT15Q9BQS2 421 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 LRRC3Q9BY71 257 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 C11orf16Q9NQ32 467 aa12.89□□□□□ -0.35
SCFD1-201ENST00000311943 SAMSN1Q9NSI8 373 aaKnown RBP12.89□□□□□ -0.35
SCFD1-201ENST00000311943 ARHGEF37A1IGU5 675 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 IKBKBO14920 756 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 NARSO43776 548 aaKnown RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 LRG1P02750 347 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 MYL4P12829 197 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 BDNFP23560 247 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 GNL1P36915 607 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 PUS10Q3MIT2 529 aaKnown RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 ZNF667Q5HYK9 610 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 PAQR9Q6ZVX9 377 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 THEM5Q8N1Q8 247 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 CMASQ8NFW8 434 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 WHAMMQ8TF30 809 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 FGF14Q92915 247 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 R3HCC1Q9Y3T6 440 aaKnown RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 A0A1W2PRU2 124 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 A8MXQ7 604 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 BEST1O76090 585 aa12.88□□□□□ -0.35
SCFD1-201ENST00000311943 WARSP23381 471 aaKnown RBP12.88□□□□□ -0.35
SCFD1-201ENST00000311943 FSHRP23945 695 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms