RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 TSC22D4Q9Y3Q8 395 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 AENQ8WTP8 325 aaKnown RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 GCNAQ96QF7 691 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 SRP72O76094 671 aaKnown RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 THRAP10827 490 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 ACADSBP45954 432 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 DMC1Q14565 340 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 ZC2HC1CQ53FD0 456 aaPredicted RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 PDCD6IPQ8WUM4 868 aaKnown RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 ZBTB10Q96DT7 871 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 CNBD2Q96M20 576 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 EFCAB1Q9HAE3 211 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 SRRM3A6NNA2 597 aaPredicted RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 MAP2K7O14733 419 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 CLPTM1O96005 669 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 HMOX2P30519 316 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 HADHAP40939 763 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
SNED1-201ENST00000310397 MOXD1Q6UVY6 613 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 SENP2Q9HC62 589 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 ANKEF1Q9NU02 776 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 ARHGEF38Q9NXL2 777 aa13.73□□□□□ -0.21
SNED1-201ENST00000310397 ZC3H11AO75152 810 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNED1-201ENST00000310397 GPR141Q7Z602 305 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 FAM192AQ9GZU8 254 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 TRIM49D1C9J1S8 452 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 BRD2P25440 801 aaKnown RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 SARSP49591 514 aaKnown RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 CIAPIN1Q6FI81 312 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 TMC3Q7Z5M5 1100 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 RMDN2Q96LZ7 410 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 FAM111AQ96PZ2 611 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 KANSL1LA0AUZ9 987 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 DFFAO00273 331 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 FDFT1P37268 417 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 LINC00523Q86TU6 105 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 ADAM33Q9BZ11 813 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 ZNF556Q9HAH1 456 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 LZTS1Q9Y250 596 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 KIDINS220Q9ULH0 1771 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 ATMINO43313 823 aaPredicted RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 SASH3O75995 380 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 RECQLP46063 649 aaPredicted RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 CLK1P49759 484 aaKnown RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 NUDT2P50583 147 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 NUP93Q8N1F7 819 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 EXD1Q8NHP7 514 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 SALL3Q9BXA9 1300 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 F8VZ95 297 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 GLRA3O75311 464 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 ATP5BP06576 529 aaKnown RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 RASA2Q15283 850 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 ZC3H12BQ5HYM0 836 aaKnown RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 SH3TC2Q8TF17 1288 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 AGAP3Q96P47 875 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 TNFRSF8P28908 595 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 PDAP1Q13442 181 aaKnown RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 RNF149Q8NC42 400 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 NT5C1AQ9BXI3 368 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 MMADHCQ9H3L0 296 aaPredicted RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 ARHGAP20Q9P2F6 1191 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 KRT72Q14CN4 511 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 FAM83EQ2M2I3 478 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 STX19Q8N4C7 294 aa13.72□□□□□ -0.21
SNED1-201ENST00000310397 LBHD1Q9BQE6 289 aaPredicted RBP13.72□□□□□ -0.21
SNED1-201ENST00000310397 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 RUNX1T1Q06455 604 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 TMEM132DQ14C87 1099 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 BOLA3Q53S33 107 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 C6orf10Q5SRN2 563 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 MPP6Q9NZW5 540 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 PRDM4Q9UKN5 801 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 ECE2O60344 883 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 WDR47O94967 919 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 LCP1P13796 627 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 BAG6P46379 1132 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 TRIM16LQ309B1 348 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 MROH9Q5TGP6 573 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 GPSM2P81274 684 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 ZNF235Q14590 738 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 LBRQ14739 615 aaKnown RBP13.71□□□□□ -0.21
SNED1-201ENST00000310397 XRRA1Q6P2D8 792 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 TTLL6Q8N841 843 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 RNF217Q8TC41 542 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 LMCD1Q9NZU5 365 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 NYAP2Q9P242 653 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 APPL1Q9UKG1 709 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 CDV3Q9UKY7 258 aaKnown RBP13.71□□□□□ -0.21
SNED1-201ENST00000310397 PRKCBP05771 671 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 PLOD1Q02809 727 aaPredicted RBP13.71□□□□□ -0.21
SNED1-201ENST00000310397 SCN4BQ8IWT1 228 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 SP8Q8IXZ3 490 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 RIN3Q8TB24 985 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 SIKE1Q9BRV8 207 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 C15orf41Q9Y2V0 281 aa13.71□□□□□ -0.21
SNED1-201ENST00000310397 FAM32AQ9Y421 112 aaKnown RBP13.71□□□□□ -0.21
SNED1-201ENST00000310397 FOXN3O00409 490 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms