RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 ZNF484Q5JVG2 852 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 TAF2Q6P1X5 1199 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 USP17L6PQ6QN14 398 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 MOB2Q70IA6 237 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 ARMCX2Q7L311 632 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 CYFIP1Q7L576 1253 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 GPR142Q7Z601 462 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 BEST2Q8NFU1 509 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 LZICQ8WZA0 190 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 CAAP1Q9H8G2 361 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 LIMA1Q9UHB6 759 aaKnown RBP8.57□□□□□ -1.04
VPS41-202ENST00000310301 BLOC1S6Q9UL45 172 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 SYNDIG1LA6NDD5 238 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 SKAP2O75563 359 aaPredicted RBP8.57□□□□□ -1.04
VPS41-202ENST00000310301 OSTNP61366 133 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 RBBP7Q16576 425 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 KIAA1755Q5JYT7 1200 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 PLEKHM3Q6ZWE6 761 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 RNF135Q8IUD6 432 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 STX19Q8N4C7 294 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 ZNF507Q8TCN5 953 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 UNC45AQ9H3U1 944 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 BARHL2Q9NY43 387 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 ZFATQ9P243 1243 aa8.57□□□□□ -1.04
VPS41-202ENST00000310301 YDJCA8MPS7 323 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ZCCHC18P0CG32 403 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 PDHBP11177 359 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 FASTKD1Q53R41 847 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 FBXO46Q6PJ61 603 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 NUP93Q8N1F7 819 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 TIPINQ9BVW5 301 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 MAF1Q9H063 256 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 PAPOLBQ9NRJ5 636 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 MARCOQ9UEW3 520 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 VWA5AO00534 786 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ANGPT2O15123 496 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 USP2O75604 605 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 IGFBP4P22692 258 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ARSEP51690 589 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 CTTNQ14247 550 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 PPP4R4Q6NUP7 873 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 RWDD4Q6NW29 188 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 HDDC2Q7Z4H3 204 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 LUZP2Q86TE4 346 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.56□□□□□ -1.046e-6■■■■■ 28.1
VPS41-202ENST00000310301 MOV10L1Q9BXT6 1211 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 KIAA1586Q9HCI6 787 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 NEDD4P46934 1319 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 NQO1P15559 274 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 TCN1P20061 433 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 CLK1P49759 484 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 ROR1Q01973 937 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 IKBKEQ14164 716 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 RCN1Q15293 331 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 EPHA7Q15375 998 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ARL13BQ3SXY8 428 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 RHPN2Q8IUC4 686 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 C4orf33Q8N1A6 199 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 NSL1Q96IY1 281 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 AGBL1Q96MI9 1066 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 MRPL1Q9BYD6 325 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 EML4Q9HC35 981 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 C20orf96Q9NUD7 363 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 IL1RAPL1Q9NZN1 696 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 SESN1Q9Y6P5 492 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 FAM47DPA6NHR8 397 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 AIM2O14862 343 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 AOC2O75106 756 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 TARSP26639 723 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 TPP2P29144 1249 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 PLA2G4AP47712 749 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ALDH7A1P49419 539 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 RUNX1T1Q06455 604 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 FSCN1Q16658 493 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 KYNUQ16719 465 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ZNF746Q6NUN9 644 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 SFR1Q86XK3 245 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 CMTM5Q96DZ9 223 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 OMA1Q96E52 524 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 CLMNQ96JQ2 1002 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 FSD1LQ9BXM9 530 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ASNSD1Q9NWL6 643 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 MTO1Q9Y2Z2 717 aaKnown RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 ZDHHC9Q9Y397 364 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 NR3C1P04150 777 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 PGK2P07205 417 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 HIF1AQ16665 826 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 CCDC142Q17RM4 750 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ZNF394Q53GI3 561 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ULK4Q96C45 1275 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 ATXN7L3BQ96GX2 97 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 C11orf70Q9BRQ4 267 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 COLEC11Q9BWP8 271 aa8.56□□□□□ -1.04
VPS41-202ENST00000310301 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.56□□□□□ -1.04
VPS41-202ENST00000310301 STK36Q9NRP7 1315 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 NMT2O60551 498 aa8.55□□□□□ -1.04
VPS41-202ENST00000310301 PPARGP37231 505 aaPredicted RBP8.55□□□□□ -1.04
VPS41-202ENST00000310301 STX3Q13277 289 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms