RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 DUSP6Q16828 381 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 CCDC142Q17RM4 750 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 KREMEN1Q96MU8 473 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 ACBD6Q9BR61 282 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
APTX-201ENST00000309615 ZCWPW1Q9H0M4 648 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 DPEP3Q9H4B8 488 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 UBE2TQ9NPD8 197 aaPredicted RBP13.77□□□□□ -0.21
APTX-201ENST00000309615 CISHQ9NSE2 258 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 APEX2Q9UBZ4 518 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.21
APTX-201ENST00000309615 WDR27A2RRH5 827 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 A8MXQ7 604 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 ATP2C2O75185 946 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 SPATA31D3P0C874 917 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 CPB1P15086 417 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 TBXAS1P24557 533 aaPredicted RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 PCSK1P29120 753 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 CLCN4P51793 760 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 NDST1P52848 882 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 UBASH3AP57075 661 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 PSMC1P62191 440 aaKnown RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 GCNT1Q02742 428 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 INCA1Q0VD86 236 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 RAB33AQ14088 237 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 NR1I3Q14994 352 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 CCDC85BQ15834 202 aaPredicted RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 SPATA31D4Q6ZUB0 917 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 LRRTM3Q86VH5 581 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 VN1R2Q8NFZ6 395 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 PPP2R3CQ969Q6 453 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 ERGIC2Q96RQ1 377 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 TWNKQ96RR1 684 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 IFNKQ9P0W0 207 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 AJAP1Q9UKB5 411 aaPredicted RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 BARX2Q9UMQ3 279 aaPredicted RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 TGM5O43548 720 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 CILPO75339 1184 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 EPCAMP16422 314 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 TSPY1Q01534 308 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 SLC39A12Q504Y0 691 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 KLHDC7AQ5VTJ3 777 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 LLGL2Q6P1M3 1020 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 UBR7Q8N806 425 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 WHAMMQ8TF30 809 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 PGLYRP2Q96PD5 576 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 SYT15Q9BQS2 421 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 FAM207AQ9NSI2 230 aaPredicted RBP13.76□□□□□ -0.21
APTX-201ENST00000309615 HCFC2Q9Y5Z7 792 aa13.76□□□□□ -0.21
APTX-201ENST00000309615 MYBPHLA2RUH7 354 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 EPHB6O15197 1021 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 LINC01565O15544 149 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 NOL4O94818 638 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 ABLIM3O94929 683 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 GLUD1P00367 558 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
APTX-201ENST00000309615 GPR17Q13304 367 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 ZNF394Q53GI3 561 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
APTX-201ENST00000309615 LILRA6Q6PI73 481 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 RNF19BQ6ZMZ0 732 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 ACOT1Q86TX2 421 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 ZNF461Q8TAF7 563 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 SLC22A17Q8WUG5 538 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 PCMTD1Q96MG8 357 aaPredicted RBP13.75□□□□□ -0.21
APTX-201ENST00000309615 CDCA3Q99618 268 aaPredicted RBP13.75□□□□□ -0.21
APTX-201ENST00000309615 CRTAC1Q9NQ79 661 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 TMLHEQ9NVH6 421 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 DNAJC12Q9UKB3 198 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 GTF3C4Q9UKN8 822 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
APTX-201ENST00000309615 VNN2O95498 520 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 UCHL3P15374 230 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 PLCB2Q00722 1185 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 KCNC3Q14003 757 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 ARHGAP44Q17R89 818 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 IQCEQ6IPM2 695 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 UNC93AQ86WB7 457 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 B3GALNT2Q8NCR0 500 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 PPM1EQ8WY54 764 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 NT5C1AQ9BXI3 368 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 XPO4Q9C0E2 1151 aaKnown RBP13.74□□□□□ -0.21
APTX-201ENST00000309615 ELOVL4Q9GZR5 314 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 PLCB1Q9NQ66 1216 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 FHOD1Q9Y613 1164 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 AP5Z1O43299 807 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 GLP2RO95838 553 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 PTPN1P18031 435 aaKnown RBP13.74□□□□□ -0.21
APTX-201ENST00000309615 RAD23BP54727 409 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 MFAP3P55082 362 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 ADCY1Q08828 1119 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 MDH1BQ5I0G3 518 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 FAM171BQ6P995 826 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 ENOSF1Q7L5Y1 443 aa13.74□□□□□ -0.21
APTX-201ENST00000309615 DCP1BQ8IZD4 617 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms