RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SPACA6W5XKT8 324 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 COPEO14579 308 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 MAPK13O15264 365 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC11A2P49281 568 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT31Q15323 416 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 HIF1AQ16665 826 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CATSPERGQ6ZRH7 1159 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 RMDN1Q96DB5 314 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 FRMD8P1Q9BZ68 369 aaPredicted RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 PRDM16Q9HAZ2 1276 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 APEX2Q9UBZ4 518 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 PPP2R2CQ9Y2T4 447 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 SUPT3HB4E1H0 165 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT16P08779 473 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 SLC9A1P19634 815 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 MAPRE2Q15555 327 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 VSTM4Q8IW00 320 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 VGLL2Q8N8G2 317 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 FAM133AQ8N9E0 248 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 KLHL29Q96CT2 875 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 TSEN34Q9BSV6 310 aaKnown RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 NHEJ1Q9H9Q4 299 aaPredicted RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ZMYM5Q9UJ78 669 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 DCTN3O75935 186 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 GCLMP48507 274 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 LRRC41Q15345 812 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ADCK2Q7Z695 626 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 KCNB2Q92953 911 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 ASB7Q9H672 318 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 AGO4Q9HCK5 861 aaKnown RBP8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 TRPC7Q9HCX4 862 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 LRRC4BQ9NT99 713 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 TMEM63CQ9P1W3 806 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CPA4Q9UI42 421 aa8.72□□□□□ -1.01
PCDHB1-201ENST00000306549 CFAP99D6REC4 459 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 NDUFA10O95299 355 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 ABCE1P61221 599 aaKnown RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 TRADDQ15628 312 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 RABGAP1LQ5R372 815 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 ANKS6Q68DC2 871 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 KRT78Q8N1N4 520 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 SYTL5Q8TDW5 730 aaPredicted RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 SYN2Q92777 582 aaPredicted RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 M0QYV0 167 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 CHUKO15111 745 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 B3GAT3O94766 335 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 IMPDH2P12268 514 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 GFAPP14136 432 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 TUFMP49411 452 aaKnown RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 PLTPP55058 493 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 MTFR1Q15390 333 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 DPCR1Q3MIW9 517 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 PPHLN1Q8NEY8 458 aaKnown RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 BCAS4Q8TDM0 211 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 WNK4Q96J92 1243 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 TAF1DQ9H5J8 278 aaPredicted RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 WARS2Q9UGM6 360 aaKnown RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 INTUQ9ULD6 942 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 SERPIND1P05546 499 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 BRAFP15056 766 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 GUCY2CP25092 1073 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 CASP14P31944 242 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 DAB2P98082 770 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 ZNF827Q17R98 1081 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 HEATR6Q6AI08 1181 aaKnown RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 MPZL3Q6UWV2 235 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 CNOT8Q9UFF9 292 aaKnown RBP8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 TRAF3IP3Q9Y228 551 aa8.71□□□□□ -1.01
PCDHB1-201ENST00000306549 SDK1Q7Z5N4 2213 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 UBA6A0AVT1 1052 aaPredicted RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 CDH2P19022 906 aaPredicted RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 SHMT1P34896 483 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ADCY2Q08462 1091 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 C6orf118Q5T5N4 469 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ST13P4Q8IZP2 240 aaPredicted RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 AGAP1Q9UPQ3 857 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 PRCPP42785 496 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 IFNAR2P48551 515 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 TP53BP2Q13625 1128 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 FAM102AQ5T9C2 384 aaPredicted RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ARL8AQ96BM9 186 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 H2AFY2Q9P0M6 372 aaPredicted RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 PIK3R2O00459 728 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 CYP3A4P08684 503 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ZDHHC17Q8IUH5 632 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 FMR1NBQ8N0W7 255 aaPredicted RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ATP6V0D2Q8N8Y2 350 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 C1QTNF7Q9BXJ2 289 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 TMEM260Q9NX78 707 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ATP8A1Q9Y2Q0 1164 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 ATP1A1P05023 1023 aaKnown RBP8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 KLHL38Q2WGJ6 581 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 HERC6Q8IVU3 1022 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 REPS2Q8NFH8 660 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 HES6Q96HZ4 224 aa8.71□□□□□ -1.02
PCDHB1-201ENST00000306549 PLEKHA8Q96JA3 519 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms