RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 ANKRD20A4Q4UJ75 823 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 TFDP3Q5H9I0 405 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ANKRD20A2Q5SQ80 823 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 MROH9Q5TGP6 573 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ANKRD20A1Q5TYW2 823 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ETNPPLQ8TBG4 499 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ABTB1Q969K4 478 aaPredicted RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 PPP1R36Q96LQ0 422 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 NR2E1Q9Y466 385 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 NCANO14594 1321 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ABCC6O95255 1503 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 PIK3CDO00329 1044 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
DDX54-201ENST00000306014 CHI3L2Q15782 390 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 CDKL3Q8IVW4 592 aaPredicted RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 LRRC57Q8N9N7 239 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 TMC2Q8TDI7 906 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 PARD3BQ8TEW8 1205 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 E2F7Q96AV8 911 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 NIF3L1Q9GZT8 377 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ZFATQ9P243 1243 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 CYP3A7-CYP3A51PA0A087WV96 503 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 LOC100653049A0A140TA62 436 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 KRT34O76011 436 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 CYP3A7P24462 503 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 EFNA5P52803 228 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 MRPS9P82933 396 aaKnown RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 PRPF39Q86UA1 669 aaKnown RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 TRIML2Q8N7C3 387 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 CCNYL1Q8N7R7 359 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 SHCBP1LQ9BZQ2 653 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 KIF9Q9HAQ2 790 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ANLNQ9NQW6 1124 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 WDR35Q9P2L0 1181 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 TMX2Q9Y320 296 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 E2F8A0AVK6 867 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 MORF4L2Q15014 288 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 ASTE1Q2TB18 679 aaPredicted RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 ACTL9Q8TC94 416 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 SPIRE2Q8WWL2 714 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 OSBPL7Q9BZF2 842 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 METTL5Q9NRN9 209 aaKnown RBP13.92□□□□□ -0.18
DDX54-201ENST00000306014 DONSONQ9NYP3 566 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 FBXO40Q9UH90 709 aa13.92□□□□□ -0.18
DDX54-201ENST00000306014 EPHB2P29323 1055 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 SSTR1P30872 391 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 SERPINB4P48594 390 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 STX1BP61266 288 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 ORC1Q13415 861 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 DNAL1Q4LDG9 190 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 HYIQ5T013 277 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 POTEAQ6S8J7 498 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 RASGEF1CQ8N431 466 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 MYLK2Q9H1R3 596 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 C2orf40Q9H1Z8 148 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 FAM96AQ9H5X1 160 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 DCLRE1BQ9H816 532 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 C17orf75Q9HAS0 396 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 DNM1LO00429 736 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 ZSCAN5DPP0CG00 497 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 MYL2P10916 166 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 CHKAP35790 457 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 MMP13P45452 471 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 GABPAQ06546 454 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 DAB2IPQ5VWQ8 1189 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 SPOCD1Q6ZMY3 1216 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 PRUNE1Q86TP1 453 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 PALB2Q86YC2 1186 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 ICA1LQ8NDH6 482 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 CKAP2Q8WWK9 683 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 KCNQ5Q9NR82 932 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 THEGQ9P2T0 379 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 DNPEPQ9ULA0 475 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 AFG3L2Q9Y4W6 797 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 KPNA7A9QM74 516 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 DDR1Q08345 913 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 JADE1Q6IE81 842 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 LRRC6Q86X45 466 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 EFHD1Q9BUP0 239 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 RSAD1Q9HA92 442 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 NUB1Q9Y5A7 615 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 SLC4A7Q9Y6M7 1214 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 SPEF2Q9C093 1822 aa13.91□□□□□ -0.18
DDX54-201ENST00000306014 GOLGA8QA0A0J9YX86 632 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 GOLGA8OA6NCC3 632 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 GOLGA8NF8WBI6 632 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 SRGAP2BP0DMP2 458 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 MED21Q13503 144 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 NAIF1Q69YI7 327 aaPredicted RBP13.9□□□□□ -0.18
DDX54-201ENST00000306014 CEP70Q8NHQ1 597 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 UBA3Q8TBC4 463 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.9□□□□□ -0.18
DDX54-201ENST00000306014 AGAP1Q9UPQ3 857 aa13.9□□□□□ -0.18
DDX54-201ENST00000306014 XPOTO43592 962 aaKnown RBP13.9□□□□□ -0.18
DDX54-201ENST00000306014 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms