RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 B2RBV5 119 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 PI4K2BG5E9Z4 385 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 PROSCO94903 275 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 GYS1P13807 737 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 GEMIN4P57678 1058 aaKnown RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 PTP4A2Q12974 167 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MTM1Q13496 603 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 CEP128Q6ZU80 1094 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 SLC25A41Q8N5S1 370 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 FAM84AQ96KN4 292 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 PAFAH2Q99487 392 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 CCDC28BQ9BUN5 200 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 VPS11Q9H270 941 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 NDE1Q9NXR1 346 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 GALNT8Q9NY28 637 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 LARSQ9P2J5 1176 aaKnown RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 PLA2G4CQ9UP65 541 aa11.45□□□□□ -0.58
ZNF558-201ENST00000301475 MTO1Q9Y2Z2 717 aaKnown RBP11.45□□□□□ -0.58
ZNF558-201ENST00000301475 F8W8V4 182 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 MAGEC1O60732 1142 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 PENKP01210 267 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 BGNP21810 368 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 PRKD1Q15139 912 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 SEPT7Q16181 437 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 HSF5Q4G112 596 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ATP13A4Q4VNC1 1196 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 RNASEH2BQ5TBB1 312 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 RC3H1Q5TC82 1133 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 KAZNQ674X7 775 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 XXYLT1Q8NBI6 393 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 NAT14Q8WUY8 206 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 RPGRQ92834 1020 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 AMNQ9BXJ7 453 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 AVENQ9NQS1 362 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 SLC7A8Q9UHI5 535 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 BTAF1O14981 1849 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 NFASCO94856 1347 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 FAM237BA0A1B0GVD1 139 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 TM9SF1O15321 606 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 PSTPIP1O43586 416 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ENO1P06733 434 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 HARSP12081 509 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 TCF4P15884 667 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ACTR3P61158 418 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 GPSM2P81274 684 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 DLGAP5Q15398 846 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 MSS51Q4VC12 460 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 CBWD2Q8IUF1 395 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 KATNAL2Q8IYT4 538 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ULK2Q8IYT8 1036 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 TAS1R2Q8TE23 839 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 CCDC127Q96BQ5 260 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 RANBP17Q9H2T7 1088 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 DNAAF2Q9NVR5 837 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ZNF148Q9UQR1 794 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 USTQ9Y2C2 406 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 MYPNQ86TC9 1320 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 CAPN14A8MX76 684 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ZSCAN9O15535 394 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 UFL1O94874 794 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 OR6B1O95007 311 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 BAG2O95816 211 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 FOSP01100 380 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 PABPC4LP0CB38 370 aaKnown RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 DHRS4L1P0CG22 281 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ETV4P43268 484 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 USP46P62068 366 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 MORF4L2Q15014 288 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 CFAP157Q5JU67 520 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 FAM91A1Q658Y4 838 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 SLFN13Q68D06 897 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ACAD11Q709F0 780 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 NLRX1Q86UT6 975 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 LCA5Q86VQ0 697 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 SCUBE1Q8IWY4 988 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ARHGAP24Q8N264 748 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 KCTD17Q8N5Z5 321 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ALLCQ8N6M5 410 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 DHRS4Q9BTZ2 278 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 TMCO1Q9UM00 188 aa11.44□□□□□ -0.58
ZNF558-201ENST00000301475 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
ZNF558-201ENST00000301475 MYH9P35579 1960 aaKnown RBP11.43□□□□□ -0.58
ZNF558-201ENST00000301475 EEF2P13639 858 aaKnown RBP11.43□□□□□ -0.58
ZNF558-201ENST00000301475 KRT5P13647 590 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 IL1R1P14778 569 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 GRAPQ13588 217 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 TRMT5Q32P41 509 aaKnown RBP11.43□□□□□ -0.58
ZNF558-201ENST00000301475 ADGRD1Q6QNK2 874 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 CENPUQ71F23 418 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 NET1Q7Z628 596 aaPredicted RBP11.43□□□□□ -0.58
ZNF558-201ENST00000301475 SPATA24Q86W54 205 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 RHOT1Q8IXI2 618 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 OGFOD1Q8N543 542 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 CCDC110Q8TBZ0 833 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 GRAPLQ8TC17 118 aaPredicted RBP11.43□□□□□ -0.58
ZNF558-201ENST00000301475 DCAKDQ8WVC6 231 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 PPP2R3CQ969Q6 453 aa11.43□□□□□ -0.58
ZNF558-201ENST00000301475 HAUS1Q96CS2 278 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms