RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 ZNF862O60290 1169 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 ZNF189O75820 626 aaPredicted RBP11.54□□□□□ -0.56
SNX20-201ENST00000300590 ITGA2BP08514 1039 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 TCF4P15884 667 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 AQP4P55087 323 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 NCOA4Q13772 614 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 GOLGB1Q14789 3259 aaKnown RBP11.54□□□□□ -0.56
SNX20-201ENST00000300590 R3HDM1Q15032 1099 aaKnown RBP11.54□□□□□ -0.56
SNX20-201ENST00000300590 PPP1R18Q6NYC8 613 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 OLFM3Q96PB7 478 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 IQCGQ9H095 443 aaKnown RBP11.54□□□□□ -0.56
SNX20-201ENST00000300590 IKBKGQ9Y6K9 419 aa11.54□□□□□ -0.56
SNX20-201ENST00000300590 ARHGEF35A5YM69 484 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SPECC1L-ADORA2AF8WAN1 911 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 CFBP00751 764 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 OATP04181 439 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 GALK1P51570 392 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 GPX6P59796 221 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 TRIP10Q15642 601 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SYDE2Q5VT97 1194 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 CCDC174Q6PII3 467 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 BRINP3Q76B58 766 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 TMPRSS6Q8IU80 811 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 CBWD2Q8IUF1 395 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 OR6Y1Q8NGX8 325 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SKA1Q96BD8 255 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 ACAP3Q96P50 834 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 WRAP73Q9P2S5 460 aaPredicted RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 PACSIN3Q9UKS6 424 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 MYOCOSA0A1B0GUC4 107 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 C6orf229H3BNL8 230 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 MTA2O94776 668 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 DLDP09622 509 aaKnown RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 RHBDL3P58872 404 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 COG7P83436 770 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 GPATCH4Q5T3I0 446 aaKnown RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 LMBRD2Q68DH5 695 aaPredicted RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 RBM44Q6ZP01 1051 aaKnown RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 ARMCX6Q7L4S7 300 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 POMGNT1Q8WZA1 660 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 GCNAQ96QF7 691 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 FIZ1Q96SL8 496 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SETDB2Q96T68 719 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SLC13A1Q9BZW2 595 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 KIAA1551Q9HCM1 1747 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 RREB1Q92766 1687 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SPDYE16A6NNV3 312 aaPredicted RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 A8MXQ7 604 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 PRR5-ARHGAP8B1AHC4 643 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 F5H6K3 240 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 ASLP04424 464 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 ABHD2P08910 425 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 KLRC2P26717 231 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 PEX2P28328 305 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 RXRBP28702 533 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 ARHGAP8P85298 464 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 TMPRSS15P98073 1019 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 MTA1Q13330 715 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 UBAP2LQ14157 1087 aaKnown RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 HIF1AQ16665 826 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SDCCAG8Q86SQ7 713 aaPredicted RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 CTAGE3PQ8IX95 158 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.53□□□□□ -0.56
SNX20-201ENST00000300590 PIP4K2CQ8TBX8 421 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 TAS1R2Q8TE23 839 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 PRPF31Q8WWY3 499 aaKnown RBP11.53□□□□□ -0.56
SNX20-201ENST00000300590 HSPBP1Q9NZL4 362 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 VAV3Q9UKW4 847 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 TMCO1Q9UM00 188 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 ZNF711Q9Y462 761 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 MYH11P35749 1972 aa11.53□□□□□ -0.56
SNX20-201ENST00000300590 SNHG28P0DPA3 235 aa11.52□□□□□ -0.56
SNX20-201ENST00000300590 CENPCQ03188 943 aa11.52□□□□□ -0.56
SNX20-201ENST00000300590 LENG1Q96BZ8 264 aaPredicted RBP11.52□□□□□ -0.56
SNX20-201ENST00000300590 CLMNQ96JQ2 1002 aa11.52□□□□□ -0.56
SNX20-201ENST00000300590 HAPLN3Q96S86 360 aa11.52□□□□□ -0.56
SNX20-201ENST00000300590 ARHGEF4Q9NR80 690 aa11.52□□□□□ -0.56
SNX20-201ENST00000300590 ADAMTSL3P82987 1691 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 TMEM150BA6NC51 233 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 GAS7O60861 476 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 CFHP08603 1231 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 GLRA2P23416 452 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 NSFP46459 744 aaKnown RBP11.52□□□□□ -0.57
SNX20-201ENST00000300590 NRLP54845 237 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 RABGAP1LQ5R372 815 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 C1orf220Q5T0J3 134 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 ANKRD22Q5VYY1 191 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 PAOXQ6QHF9 649 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 NLRX1Q86UT6 975 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 RHOT1Q8IXI2 618 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 RBM12BQ8IXT5 1001 aaKnown RBP11.52□□□□□ -0.57
SNX20-201ENST00000300590 MCOLN2Q8IZK6 566 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 ZNF276Q8N554 614 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 XXYLT1Q8NBI6 393 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 FBXO36Q8NEA4 188 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 ZNF398Q8TD17 642 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 FAM20AQ96MK3 541 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 MIS12Q9H081 205 aa11.52□□□□□ -0.57
SNX20-201ENST00000300590 SERPINB13Q9UIV8 391 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms