RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 AP4S1Q9Y587 144 aa17.21■□□□□ 0.35
SNAPC4-201ENST00000298532 CST8O60676 142 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 KRT16P08779 473 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 PDGFRAP16234 1089 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 SPATA18Q8TC71 538 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 RAET1EQ8TD07 263 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 CNBD2Q96M20 576 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 TASP1Q9H6P5 420 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.34
SNAPC4-201ENST00000298532 A0A0A6YYK5 440 aaPredicted RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 TCN1P20061 433 aaPredicted RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 TTC33Q6PID6 262 aaPredicted RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 VEGFAP15692 232 aaPredicted RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 RPA1P27694 616 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 TOB1P50616 345 aaPredicted RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 DEFA1P59665 94 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 DEFA3P59666 94 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 COG2Q14746 738 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 GJB7Q6PEY0 223 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 TEX12Q9BXU0 123 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 HACD3Q9P035 362 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 FAM196BA6NMK8 535 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 FKBP6O75344 327 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 USP10Q14694 798 aaKnown RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 TRIM16LQ309B1 348 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 FUKQ8N0W3 1084 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 PACSIN1Q9BY11 444 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 TMEM8AQ9HCN3 771 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 KBTBD4Q9NVX7 518 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 PAX7P23759 505 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 CACNA2D1P54289 1103 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 SNRPFP62306 86 aaKnown RBP17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 DAGLBQ8NCG7 672 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 LRCH1Q9Y2L9 728 aa17.2■□□□□ 0.34
SNAPC4-201ENST00000298532 ATP9AO75110 1047 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 PON1P27169 355 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 NFX1Q12986 1120 aaKnown RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 ZC2HC1CQ53FD0 456 aaPredicted RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 NUP93Q8N1F7 819 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 ABCF3Q9NUQ8 709 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 PJA2O43164 708 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 SKAP2O75563 359 aaPredicted RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 HUNKP57058 714 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 ZNF280CQ8ND82 737 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 ATXN2LQ8WWM7 1075 aaKnown RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 KRT35Q92764 455 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 E5RI56 91 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 GFAPP14136 432 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 EFNA5P52803 228 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 PLOD1Q02809 727 aaPredicted RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 AASDHQ4L235 1098 aaPredicted RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 IZUMO2Q6UXV1 221 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 YTHDF3Q7Z739 585 aaKnown RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 ELP3Q9H9T3 547 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 TRMT5Q32P41 509 aaKnown RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 ZC3H12BQ5HYM0 836 aaKnown RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 MTDHQ86UE4 582 aaKnown RBP17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 IFNEQ86WN2 208 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
SNAPC4-201ENST00000298532 BCL9O00512 1426 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 HNRNPRO43390 633 aaKnown RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 GPR141Q7Z602 305 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 PAWRQ96IZ0 340 aaKnown RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 MAML3Q96JK9 1138 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 MTIF3Q9H2K0 278 aaKnown RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 C3orf70A6NLC5 250 aaPredicted RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 CLPTM1O96005 669 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 NUP107P57740 925 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 NME3Q13232 169 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 PPHLN1Q8NEY8 458 aaKnown RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 RNF217Q8TC41 542 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 TSPAN17Q96FV3 270 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 NYAP2Q9P242 653 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 SALL3Q9BXA9 1300 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 PSTPIP1O43586 416 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 TMCC1O94876 653 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 SLC25A27O95847 323 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 NUDT2P50583 147 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 TROAPQ12815 778 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 LBRQ14739 615 aaKnown RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 STILQ15468 1287 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 WDR72Q3MJ13 1102 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 CENPPQ6IPU0 288 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 ACAD10Q6JQN1 1059 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 MSL3Q8N5Y2 521 aaKnown RBP17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 NSMCE4AQ9NXX6 385 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 A8MXQ7 604 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 RPS6KA5O75582 802 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 ZNF844Q08AG5 666 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 NCOA4Q13772 614 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 Q3C1V9 767 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 MROH9Q5TGP6 573 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 EGFL8Q99944 293 aa17.18■□□□□ 0.34
SNAPC4-201ENST00000298532 PSMD3O43242 534 aa17.17■□□□□ 0.34
SNAPC4-201ENST00000298532 DGAT1O75907 488 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms