RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 GSTCDQ8NEC7 633 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 SPATA4Q8NEY3 305 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 NT5C1AQ9BXI3 368 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 TRPV6Q9H1D0 765 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 EPC1Q9H2F5 836 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 ANKZF1Q9H8Y5 726 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 GDAP2Q9NXN4 497 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 SMARCAL1Q9NZC9 954 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 GIT1Q9Y2X7 761 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 CEP83Q9Y592 693 aa16.5■□□□□ 0.23
LSM6-201ENST00000296581 MEIS3P2A8K0S8 358 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 ARVCFO00192 962 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 MGEA5O60502 916 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 CALB1P05937 261 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 H2AFXP16104 143 aaPredicted RBP16.49■□□□□ 0.23
LSM6-201ENST00000296581 COMTP21964 271 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 ORC1Q13415 861 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 CNGA2Q16280 664 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 C2CD6Q53TS8 623 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 LIMS2Q7Z4I7 341 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 RASGEF1CQ8N431 466 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 MMGT1Q8N4V1 131 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 ACTRT1Q8TDG2 376 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 CD101Q93033 1021 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 ZFP42Q96MM3 310 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 MRPL45Q9BRJ2 306 aaKnown RBP16.49■□□□□ 0.23
LSM6-201ENST00000296581 SELENOOQ9BVL4 669 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 SEZ6LQ9BYH1 1024 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 MRPL47Q9HD33 250 aaKnown RBP16.49■□□□□ 0.23
LSM6-201ENST00000296581 LCMT1Q9UIC8 334 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.49■□□□□ 0.23
LSM6-201ENST00000296581 SCINQ9Y6U3 715 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 CKBP12277 381 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 TAF6P49848 677 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 C2orf54Q08AI8 447 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 MAMLD1Q13495 774 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 LLGL2Q6P1M3 1020 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 EP400NLQ6ZTU2 488 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 BTBD6Q96KE9 485 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 GOLGA2P5Q9HBQ8 144 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 ANAPC7Q9UJX3 599 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 PTPN22Q9Y2R2 807 aa16.49■□□□□ 0.23
LSM6-201ENST00000296581 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.49■□□□□ 0.23
LSM6-201ENST00000296581 TCRBV5S1A1TA0A578 114 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 KPNA7A9QM74 516 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 O00370 1275 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 SPTLC1O15269 473 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 SOWAHAQ2M3V2 549 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 SV2CQ496J9 727 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 SGO2Q562F6 1265 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 AGMOQ6ZNB7 445 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
LSM6-201ENST00000296581 WNT8AQ9H1J5 351 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 CARD9Q9H257 536 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 PAK6Q9NQU5 681 aaPredicted RBP16.48■□□□□ 0.23
LSM6-201ENST00000296581 A0A0U1RQF3 1178 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 MLH1P40692 756 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 GAD1Q99259 594 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 PARVAQ9NVD7 372 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 TTC7AQ9ULT0 858 aaPredicted RBP16.48■□□□□ 0.23
LSM6-201ENST00000296581 NME7Q9Y5B8 376 aa16.48■□□□□ 0.23
LSM6-201ENST00000296581 DNM1LO00429 736 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 CEP104O60308 925 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 MICAL2O94851 1124 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 CTNNA2P26232 953 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 CDK7P50613 346 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 DCAF12L1Q5VU92 463 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 LCLAT1Q6UWP7 414 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 PHLDB2Q86SQ0 1253 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 ERICH1Q86X53 443 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 ALG3Q92685 438 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 LPPQ93052 612 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 PARD6BQ9BYG5 372 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 CYTH4Q9UIA0 394 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 ARL5CA6NH57 179 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 PEX5P50542 639 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 LILRA4P59901 499 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 STILQ15468 1287 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 UBL4BQ8N7F7 174 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 KBTBD7Q8WVZ9 684 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 ADAM2Q99965 735 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.47■□□□□ 0.23
LSM6-201ENST00000296581 BEGAINQ9BUH8 593 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 MIOSQ9NXC5 875 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 RAB21Q9UL25 225 aa16.47■□□□□ 0.23
LSM6-201ENST00000296581 MYO1FO00160 1098 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 PGRMC1O00264 195 aaKnown RBP16.46■□□□□ 0.23
LSM6-201ENST00000296581 THP07101 528 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 RHOXF2BP0C7M4 288 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 SKIP12755 728 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 CTNNA1P35221 906 aaKnown RBP16.46■□□□□ 0.23
LSM6-201ENST00000296581 SLC1A1P43005 524 aa16.46■□□□□ 0.23
LSM6-201ENST00000296581 GPD2P43304 727 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms