RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 PPP2R5DQ14738 602 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 DPY19L2P1Q6NXN4 242 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 TRABD2AQ86V40 505 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 GLIS1Q8NBF1 620 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 FEZF2Q8TBJ5 459 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 SLC10A4Q96EP9 437 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 PAFAH2Q99487 392 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 DENND2DQ9H6A0 471 aaPredicted RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 SENP1Q9P0U3 644 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 AGO2Q9UKV8 859 aaKnown RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 F8VP50 259 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 MCF2LO15068 1137 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 ATP9AO75110 1047 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 RNF8O76064 485 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 ZWINTO95229 277 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 BRD2P25440 801 aaKnown RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 VHLP40337 213 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 DACT2Q5SW24 774 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 ISLR2Q6UXK2 745 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 HERPUD2Q9BSE4 406 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 DOCK2Q92608 1830 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 IQANK1A0A1B0GTG1 560 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 MYL2P10916 166 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 GCLCP48506 637 aaPredicted RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 ARID3BQ8IVW6 561 aaPredicted RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 FAM71DQ8N9W8 422 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 FAF2Q96CS3 445 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 NSL1Q96IY1 281 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 ACAP3Q96P50 834 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 RIT2Q99578 217 aa14.08□□□□□ -0.16
SCAF4-201ENST00000286835 XPO7Q9UIA9 1087 aaKnown RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 MAGED2Q9UNF1 606 aaPredicted RBP14.08□□□□□ -0.16
SCAF4-201ENST00000286835 CCDC88AQ3V6T2 1871 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 WEE2P0C1S8 567 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 GTF2H1P32780 548 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 PTK7Q13308 1070 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 ORC1Q13415 861 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TLDC1Q6P9B6 456 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 SCG3Q8WXD2 468 aaKnown RBP14.07□□□□□ -0.16
SCAF4-201ENST00000286835 AKT1S1Q96B36 256 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TAAR1Q96RJ0 339 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 POLR3FQ9H1D9 316 aaPredicted RBP14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 MYH11P35749 1972 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 EME2A4GXA9 379 aaPredicted RBP14.07□□□□□ -0.16
SCAF4-201ENST00000286835 RFWD3Q6PCD5 774 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TEX9Q8N6V9 391 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 ATP6V0A1Q93050 837 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TMEM120AQ9BXJ8 343 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 CCDC134Q9H6E4 229 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TXNDC16Q9P2K2 825 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 HACL1Q9UJ83 578 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 DNALI1O14645 258 aaPredicted RBP14.07□□□□□ -0.16
SCAF4-201ENST00000286835 MGAT5Q09328 741 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 KRT81Q14533 505 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TKFCQ3LXA3 575 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 C1orf228Q6PIY5 440 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 RCOR2Q8IZ40 523 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 RFWD2Q8NHY2 731 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 MBOAT7Q96N66 472 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 RNF146Q9NTX7 359 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 STARD13Q9Y3M8 1113 aa14.07□□□□□ -0.16
SCAF4-201ENST00000286835 TMEM191BP0C7N4 346 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 IGBP1P78318 339 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 KLHL38Q2WGJ6 581 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 LGSNQ5TDP6 509 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 RNF220Q5VTB9 566 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 RIBC1Q8N443 379 aaPredicted RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 MKL1Q969V6 931 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 RPAP3Q9H6T3 665 aaPredicted RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 MYH14Q7Z406 1995 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 E2F8A0AVK6 867 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 PAPOLAP51003 745 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 UGCGQ16739 394 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 RGS9BPQ6ZS82 235 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 SDCCAG8Q86SQ7 713 aaPredicted RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 THNSL1Q8IYQ7 743 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 ZCCHC9Q8N567 271 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 CCDC33Q8N5R6 958 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 TMEM35BQ8NCS4 154 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 LMO3Q8TAP4 145 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 ACTL9Q8TC94 416 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 TBC1D22BQ9NU19 505 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 SLC17A7Q9P2U7 560 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 SPDYE5A6NIY4 337 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 EDF1O60869 148 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 OTUD4Q01804 1114 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 KHDC1Q4VXA5 237 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 SLC9A9Q8IVB4 645 aa14.06□□□□□ -0.16
SCAF4-201ENST00000286835 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 DDX60Q8IY21 1712 aaKnown RBP14.06□□□□□ -0.16
SCAF4-201ENST00000286835 SRGAP2CP0DJJ0 459 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 PYGBP11216 843 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 NCF2P19878 526 aaPredicted RBP14.05□□□□□ -0.16
SCAF4-201ENST00000286835 BLMHQ13867 455 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 PDK4Q16654 411 aa14.05□□□□□ -0.16
SCAF4-201ENST00000286835 CYP1B1Q16678 543 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms