RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C4BPAP04003 597 aaKnown RBP28.95■■■□□ 2.23
CBX4-201ENST00000269397 SLC18A1P54219 525 aa28.95■■■□□ 2.23
CBX4-201ENST00000269397 OGDHQ02218 1023 aa28.95■■■□□ 2.23
CBX4-201ENST00000269397 SLC45A4Q5BKX6 768 aa28.95■■■□□ 2.23
CBX4-201ENST00000269397 PTPRN2Q92932 1015 aa28.95■■■□□ 2.23
CBX4-201ENST00000269397 RBM41Q96IZ5 413 aaKnown RBP28.95■■■□□ 2.23
CBX4-201ENST00000269397 ZBTB45Q96K62 511 aaPredicted RBP28.95■■■□□ 2.23
CBX4-201ENST00000269397 RABGEF1Q9UJ41 708 aa28.95■■■□□ 2.23
CBX4-201ENST00000269397 YDJCA8MPS7 323 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 C2CD2LO14523 706 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 ATP4AP20648 1035 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 MARK3P27448 753 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 LIG4P49917 911 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 GEMIN4P57678 1058 aaKnown RBP28.95■■■□□ 2.22
CBX4-201ENST00000269397 HIF1AQ16665 826 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 CCDC142Q17RM4 750 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 FNBP1LQ5T0N5 605 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 ENDOVQ8N8Q3 282 aaKnown RBP28.95■■■□□ 2.22
CBX4-201ENST00000269397 NTPCRQ9BSD7 190 aaKnown RBP28.95■■■□□ 2.22
CBX4-201ENST00000269397 ZNF341Q9BYN7 854 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 IP6K2Q9UHH9 426 aa28.95■■■□□ 2.22
CBX4-201ENST00000269397 ATP6V1C1P21283 382 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 CTCFP49711 727 aaPredicted RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 VCPP55072 806 aaKnown RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 SEZ6Q53EL9 994 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 PHF13Q86YI8 300 aaPredicted RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 RMDN3Q96TC7 470 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 CADM1Q9BY67 442 aaKnown RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 DEFB129Q9H1M3 183 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 ARL8BQ9NVJ2 186 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 COL11A2P13942 1736 aaPredicted RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 ZNF541Q9H0D2 1346 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 JAK3P52333 1124 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 GDF10P55107 478 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 OASLQ15646 514 aaKnown RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 WASHC2DQ5SRD0 308 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 LRRC6Q86X45 466 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 LARGE2Q8N3Y3 721 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 PYROXD1Q8WU10 500 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 NUB1Q9Y5A7 615 aa28.94■■■□□ 2.22
CBX4-201ENST00000269397 MYH9P35579 1960 aaKnown RBP28.94■■■□□ 2.22
CBX4-201ENST00000269397 C2orf71A6NGG8 1288 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 CLGNO14967 610 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 ATP2A1O14983 1001 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 IRX1P78414 480 aaPredicted RBP28.93■■■□□ 2.22
CBX4-201ENST00000269397 C3orf62Q6ZUJ4 267 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP28.93■■■□□ 2.229e-6■■□□□ 11.8
CBX4-201ENST00000269397 HEY2Q9UBP5 337 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 SLC24A2Q9UI40 661 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 SPDYE5A6NIY4 337 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 MAP3K13O43283 966 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 PLA2G6O60733 806 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 GARTP22102 1010 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 ZNF394Q53GI3 561 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 RHPN2Q8IUC4 686 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 LTBP4Q8N2S1 1624 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 SAMD3Q8N6K7 520 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 DNAJC9Q8WXX5 260 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 PAFAH2Q99487 392 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 XPNPEP1Q9NQW7 623 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 FBXO6Q9NRD1 293 aaPredicted RBP28.93■■■□□ 2.22
CBX4-201ENST00000269397 ANKFY1Q9P2R3 1169 aa28.93■■■□□ 2.22
CBX4-201ENST00000269397 ZNF70Q9UC06 446 aaPredicted RBP28.93■■■□□ 2.22
CBX4-201ENST00000269397 SPDYE2BA6NHP3 402 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 SPDYE6P0CI01 402 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 MUM1Q2TAK8 710 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 EFHC2Q5JST6 749 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 METTL5Q9NRN9 209 aaKnown RBP28.92■■■□□ 2.22
CBX4-201ENST00000269397 TMEM191CA6NGB0 347 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 TRAFD1O14545 582 aaPredicted RBP28.92■■■□□ 2.22
CBX4-201ENST00000269397 EXTL3O43909 919 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 TMEM191BP0C7N4 346 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 TROVE2P10155 538 aaKnown RBP eCLIP28.92■■■□□ 2.22
CBX4-201ENST00000269397 SMTNL2Q2TAL5 461 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 SLC27A3Q5K4L6 730 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 DCUN1D2Q6PH85 259 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 C4orf50Q6ZRC1 276 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 MCF2L2Q86YR7 1114 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 NLGN1Q8N2Q7 840 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 ZNF276Q8N554 614 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 TEX9Q8N6V9 391 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 WDR83Q9BRX9 315 aaKnown RBP28.92■■■□□ 2.22
CBX4-201ENST00000269397 HAPLN2Q9GZV7 340 aa28.92■■■□□ 2.22
CBX4-201ENST00000269397 hCG_1818297A0A087WSY0 165 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 ZWINTO95229 277 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 SWSAP1Q6NVH7 229 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 TRIM72Q6ZMU5 477 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 LMNTD2Q8IXW0 634 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 FAM151AQ8WW52 585 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 ZNF606Q8WXB4 792 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 SYT15Q9BQS2 421 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 SEPT9Q9UHD8 586 aaPredicted RBP28.91■■■□□ 2.22
CBX4-201ENST00000269397 E7ENQ6 273 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 KRT76Q01546 638 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 SATB1Q01826 763 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 C1QBPQ07021 282 aaKnown RBP28.91■■■□□ 2.22
CBX4-201ENST00000269397 THEMIS2Q5TEJ8 643 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 VCPIP1Q96JH7 1222 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 ANKRD27Q96NW4 1050 aa28.91■■■□□ 2.22
CBX4-201ENST00000269397 SHOC2Q9UQ13 582 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms