RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 PPIL2Q13356 520 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 FASTKD1Q53R41 847 aaKnown RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 POTEAQ6S8J7 498 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 MTHFD1LQ6UB35 978 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ACSF2Q96CM8 615 aaPredicted RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 GRAMD1AQ96CP6 724 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 CYFIP2Q96F07 1278 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ATXN7L3BQ96GX2 97 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 TMEM169Q96HH4 297 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 PURBQ96QR8 312 aaKnown RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 WDR18Q9BV38 432 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ISCUQ9H1K1 167 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 XPO7Q9UIA9 1087 aaKnown RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 CCDC195A0A1B0GUA6 201 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ALDH7A1P49419 539 aaKnown RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ATN1P54259 1190 aaPredicted RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 KYNUQ16719 465 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ANO4Q32M45 955 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ANKRD20A4Q4UJ75 823 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ANKRD20A8PQ5CZ79 823 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ANKRD20A2Q5SQ80 823 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ANKRD20A1Q5TYW2 823 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 DNAJB3Q8WWF6 145 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ZBTB18Q99592 522 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 LBHD1Q9BQE6 289 aaPredicted RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 PIK3C2AO00443 1686 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 C2CD2LO14523 706 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 GSTA4O15217 222 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 AP1G2O75843 785 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 VDRP11473 427 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 MAPRE1Q15691 268 aaKnown RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 LRIG3Q6UXM1 1119 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 RIOX2Q8IUF8 465 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 WDR49Q8IV35 697 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 SH3TC2Q8TF17 1288 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 SLC35C1Q96A29 364 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 KCNMB3Q9NPA1 279 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 SMG5Q9UPR3 1016 aaKnown RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 GOLGA8RI6L899 631 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ADCY3O60266 1144 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 UBA1P22314 1058 aaKnown RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 RRM1P23921 792 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 KRT33BQ14525 404 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 TATDN1Q6P1N9 297 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 ZNF571Q7Z3V5 609 aaPredicted RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 RNF135Q8IUD6 432 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 STARD7Q9NQZ5 370 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 LSM7Q9UK45 103 aaKnown RBP16.13■□□□□ 0.17
TIMP3-201ENST00000266085 TRIM33Q9UPN9 1127 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
TIMP3-201ENST00000266085 DCDC2CA8MYV0 355 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 ODC1P11926 461 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 IL1RL1Q01638 556 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 TLK2Q86UE8 772 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 CCDC60Q8IWA6 550 aaPredicted RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 DDIT4Q9NX09 232 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 CCDC78A2IDD5 438 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 CYB561D2O14569 222 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 THP07101 528 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 RPSAP08865 295 aaKnown RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 RASIP1Q5U651 963 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 NOP9Q86U38 636 aaKnown RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 KRT35Q92764 455 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 TATDN2Q93075 761 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 PPCSQ9HAB8 311 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 PSMD10O75832 226 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 CYBBP04839 570 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 COILP38432 576 aaPredicted RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 FNTAP49354 379 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 SLC12A3P55017 1021 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 ACVR2BQ13705 512 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 MORF4L2Q15014 288 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 UGP2Q16851 508 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 LONRF1Q17RB8 773 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 SHROOM1Q2M3G4 852 aaPredicted RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 RIN2Q8WYP3 895 aaPredicted RBP16.12■□□□□ 0.17
TIMP3-201ENST00000266085 FGRP09769 529 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 PRLRP16471 622 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 SH3RF1Q7Z6J0 888 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 SLC47A2Q86VL8 602 aa16.12■□□□□ 0.17
TIMP3-201ENST00000266085 PIK3CDO00329 1044 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 PSMD3O43242 534 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 KCNA1Q09470 495 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 DGKZQ13574 1117 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 HIPK4Q8NE63 616 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 CLMNQ96JQ2 1002 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 ZNF518BQ9C0D4 1074 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 FAM8A1Q9UBU6 413 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 ANGPTL2Q9UKU9 493 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 CHMP2BQ9UQN3 213 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 ACKR2O00590 384 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 SPAG6O75602 509 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 AKR1A1P14550 325 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 EPHB2P29323 1055 aa16.11■□□□□ 0.17
TIMP3-201ENST00000266085 MDH1P40925 334 aaKnown RBP16.11■□□□□ 0.17
TIMP3-201ENST00000266085 MAGEA4P43358 317 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms