RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TMPRSS6Q8IU80 811 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 NUP93Q8N1F7 819 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 SNX27Q96L92 541 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 TMEM120AQ9BXJ8 343 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 SLC17A7Q9P2U7 560 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 ASIC3Q9UHC3 531 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 LZTS1Q9Y250 596 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 LY75O60449 1722 aa9.23□□□□□ -0.93
VAPB-201ENST00000265619 ZNF831Q5JPB2 1677 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CAPN8A6NHC0 703 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CYTH3O43739 400 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 FUCA1P04066 466 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 EEF2P13639 858 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 IDO1P14902 403 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 SMARCA1P28370 1054 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CASP4P49662 377 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 ACTR3P61158 418 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 PLCB3Q01970 1234 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 MMEL1Q495T6 779 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 IYDQ6PHW0 289 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 KCTD1Q719H9 257 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 TMC7Q7Z402 723 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 DGKHQ86XP1 1220 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 HNRNPABQ99729 332 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 TSG101Q99816 390 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 SEPT11Q9NVA2 429 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 DUOX1Q9NRD9 1551 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 NCANO14594 1321 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 BTBD19C9JJ37 291 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CLDN3O15551 220 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CDH16O75309 829 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 LRRN2O75325 713 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 BANF1O75531 89 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 TRMUO75648 421 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 HLA-DOAP06340 250 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 C6orf222P0C671 652 aaPredicted RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 IL1R1P14778 569 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 ATP5DP30049 168 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 VCPP55072 806 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 NPEPPSP55786 919 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 ARL4CP56559 192 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 FOLH1Q04609 750 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 PRAMEF18Q5VWM3 479 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 PATL1Q86TB9 770 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 CCDC65Q8IXS2 484 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 ARHGAP24Q8N264 748 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 OGFOD1Q8N543 542 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 SYT2Q8N9I0 419 aaPredicted RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 GDPD5Q8WTR4 605 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 SCFD1Q8WVM8 642 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 KCTD10Q9H3F6 313 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 EPB41L1Q9H4G0 881 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 KIF13BQ9NQT8 1826 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 FAM237BA0A1B0GVD1 139 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 FCHO1O14526 889 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 EDIL3O43854 480 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CLPTM1O96005 669 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 COMTP21964 271 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 MYBPC1Q00872 1141 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CALCOCO2Q13137 446 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 MESDQ14696 234 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 C1orf146Q5VVC0 180 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 THOC7Q6I9Y2 204 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 ZNF746Q6NUN9 644 aaPredicted RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 RGS9BPQ6ZS82 235 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 FAM172AQ8WUF8 416 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 SLC20A1Q8WUM9 679 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 TMEM47Q9BQJ4 181 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 NEURL2Q9BR09 285 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 ZNF395Q9H8N7 513 aaPredicted RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 IL17RBQ9NRM6 502 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 TMEM260Q9NX78 707 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 PARP2Q9UGN5 583 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 FAM32AQ9Y421 112 aaKnown RBP9.22□□□□□ -0.93
VAPB-201ENST00000265619 AK5Q9Y6K8 562 aa9.22□□□□□ -0.93
VAPB-201ENST00000265619 RREB1Q92766 1687 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 SLC37A4O43826 429 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 TYROBPO43914 113 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 NOP14P78316 857 aaKnown RBP9.21□□□□□ -0.93
VAPB-201ENST00000265619 ITGA9Q13797 1035 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 C16orf72Q14CZ0 275 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 EPHA7Q15375 998 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 BCL2A1Q16548 175 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 ZBTB46Q86UZ6 589 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 PPP1R14BQ96C90 147 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 RBM15Q96T37 977 aaKnown RBP eCLIP9.21□□□□□ -0.93
VAPB-201ENST00000265619 ZSWIM1Q9BR11 485 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 MRPL1Q9BYD6 325 aaKnown RBP9.21□□□□□ -0.93
VAPB-201ENST00000265619 AFG3L2Q9Y4W6 797 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 CEPT1Q9Y6K0 416 aa9.21□□□□□ -0.93
VAPB-201ENST00000265619 USP17L5A8MUK1 530 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 ZWINTO95229 277 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 PMLP29590 882 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 RPL5P46777 297 aaKnown RBP9.21□□□□□ -0.94
VAPB-201ENST00000265619 AMPD3Q01432 767 aa9.21□□□□□ -0.94
VAPB-201ENST00000265619 USH1GQ495M9 461 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms