RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 THAP11Q96EK4 314 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 SRP68Q9UHB9 627 aaKnown RBP17.07■□□□□ 0.32
GPC1-201ENST00000264039 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.07■□□□□ 0.32
GPC1-201ENST00000264039 NOL3O60936 208 aaKnown RBP17.07■□□□□ 0.32
GPC1-201ENST00000264039 GDF11O95390 407 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 OAS1P00973 400 aaKnown RBP17.07■□□□□ 0.32
GPC1-201ENST00000264039 GYS1P13807 737 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 CYP11B1P15538 503 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 CA8P35219 290 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 AQP4P55087 323 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 SLF2Q8IX21 1173 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 ZNF34Q8IZ26 560 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 HSPBAP1Q96EW2 488 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 UVRAGQ9P2Y5 699 aa17.07■□□□□ 0.32
GPC1-201ENST00000264039 PRR5-ARHGAP8B1AHC4 643 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 PIK3R2O00459 728 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 MRPS9P82933 396 aaKnown RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 ARHGAP8P85298 464 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 ALCAMQ13740 583 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 KLHL38Q2WGJ6 581 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 BRDTQ58F21 947 aaPredicted RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 FOXB2Q5VYV0 432 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 TPTE2Q6XPS3 522 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.06■□□□□ 0.32
GPC1-201ENST00000264039 IMPG2Q9BZV3 1241 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 LIN28AQ9H9Z2 209 aaKnown RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 TMCO1Q9UM00 188 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 GPR75-ASB3A0A0A6YYF3 556 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 C6orf222P0C671 652 aaPredicted RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 RPA1P27694 616 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 PPP3CAQ08209 521 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 GRIK5Q16478 980 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 DARS2Q6PI48 645 aaKnown RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 HSPH1Q92598 858 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 KIFC3Q9BVG8 833 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 AMNQ9BXJ7 453 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 ASB3Q9Y575 518 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 RPS6KL1Q9Y6S9 549 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 XPOTO43592 962 aaKnown RBP17.06■□□□□ 0.32
GPC1-201ENST00000264039 KRT37O76014 449 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 SLC12A3P55017 1021 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 MPP3Q13368 585 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 MAP3K21Q5TCX8 1036 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 CC2D2BQ6DHV5 1058 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 CPXCR1Q8N123 301 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 SMYD2Q9NRG4 433 aa17.06■□□□□ 0.32
GPC1-201ENST00000264039 EYA4O95677 639 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 SRGAP2CP0DJJ0 459 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 SRGAP2BP0DMP2 458 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 ENO3P13929 434 aaPredicted RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 SOX11P35716 441 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 SERPINB8P50452 374 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 PSMC1P62191 440 aaKnown RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 TMEM62Q0P6H9 643 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 DLG1Q12959 904 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 DCTN2Q13561 401 aaKnown RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 XKR9Q5GH70 373 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 B3GNT6Q6ZMB0 384 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 POLNQ7Z5Q5 900 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 ZNF577Q9BSK1 485 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 LRRC19Q9H756 370 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 THEGQ9P2T0 379 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 UMODL1Q5DID0 1318 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 GIPC1O14908 333 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 TGFB1I1O43294 461 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 TPD52L2O43399 206 aaKnown RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 WEE2P0C1S8 567 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 NDUFAF2Q8N183 169 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 NLRP7Q8WX94 980 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 NR1H4Q96RI1 486 aaPredicted RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 PFDN4Q9NQP4 134 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 MTMR4Q9NYA4 1195 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 SERPINB13Q9UIV8 391 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 NCANO14594 1321 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 M0R2N6 131 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 VCLP18206 1134 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 ESRRGP62508 458 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 STX3Q13277 289 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 EML3Q32P44 896 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 PLEKHG4Q58EX7 1191 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 CBWD2Q8IUF1 395 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 GLIS1Q8NBF1 620 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 EPS8L1Q8TE68 723 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 FAF2Q96CS3 445 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 PAIP1Q9H074 479 aaKnown RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 KRT82Q9NSB4 513 aa17.05■□□□□ 0.32
GPC1-201ENST00000264039 XPO7Q9UIA9 1087 aaKnown RBP17.05■□□□□ 0.32
GPC1-201ENST00000264039 ADGRA3Q8IWK6 1321 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 NID2Q14112 1375 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 ZMYM2Q9UBW7 1377 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 RGS2P41220 211 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 PSMD7P51665 324 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 STAT2P52630 851 aa17.04■□□□□ 0.32
GPC1-201ENST00000264039 NFX1Q12986 1120 aaKnown RBP17.04■□□□□ 0.32
GPC1-201ENST00000264039 GSTA3Q16772 222 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms