RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 FAM105AQ9NUU6 356 aa10.31□□□□□ -0.76
TTC39A-201ENST00000262675 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
TTC39A-201ENST00000262675 NENFQ9UMX5 172 aa10.31□□□□□ -0.76
TTC39A-201ENST00000262675 PCDHB13Q9Y5F0 798 aa10.31□□□□□ -0.76
TTC39A-201ENST00000262675 ZC3H11AO75152 810 aaKnown RBP eCLIP10.3□□□□□ -0.76
TTC39A-201ENST00000262675 PHACTR2O75167 634 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 AKAP3O75969 853 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 KIF4AO95239 1232 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 H2AFZP0C0S5 128 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 MAPTP10636 758 aaKnown RBP10.3□□□□□ -0.76
TTC39A-201ENST00000262675 CASP5P51878 434 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 PSMC5P62195 406 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 CUL1Q13616 776 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 RARS2Q5T160 578 aaKnown RBP10.3□□□□□ -0.76
TTC39A-201ENST00000262675 C15orf39Q6ZRI6 1047 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 C1orf186Q6ZWK4 172 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 H2AFVQ71UI9 128 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 CATSPER4Q7RTX7 472 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 SLC9A9Q8IVB4 645 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 SNX27Q96L92 541 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 APOL5Q9BWW9 433 aa10.3□□□□□ -0.76
TTC39A-201ENST00000262675 SUCLA2Q9P2R7 463 aaPredicted RBP10.3□□□□□ -0.76
TTC39A-201ENST00000262675 PIN4Q9Y237 131 aaKnown RBP10.3□□□□□ -0.76
TTC39A-201ENST00000262675 ASAP2O43150 1006 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 CHMP2AO43633 222 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 ZMYND10O75800 440 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 GALTP07902 379 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 MYBP10242 640 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SLC9A1P19634 815 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 HOXD13P35453 343 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 RFC5P40937 340 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SNRPFP62306 86 aaKnown RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 CACNB1Q02641 598 aaPredicted RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SLC20A2Q08357 652 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 RAD51AP2Q09MP3 1159 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 MTERF2Q49AM1 385 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 EMC10Q5UCC4 262 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 CCDC149Q6ZUS6 474 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 ZNF571Q7Z3V5 609 aaPredicted RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 GPR149Q86SP6 731 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 CMASQ8NFW8 434 aaPredicted RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 TCP11Q8WWU5 503 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SLC7A3Q8WY07 619 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 BORCS6Q96GS4 357 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 FAM193BQ96PV7 902 aaPredicted RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 PHOX2BQ99453 314 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 RTP3Q9BQQ7 232 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 STK33Q9BYT3 514 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 TBC1D13Q9NVG8 400 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 IGSF9Q9P2J2 1179 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 A0A087WZ62 844 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 P4HA2O15460 535 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SLITRK3O94933 977 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 HEXIM1O94992 359 aaKnown RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 GUCY2CP25092 1073 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 CXCR5P32302 372 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 PBX3P40426 434 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 MATR3P43243 847 aaKnown RBP eCLIP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SKOR1P84550 965 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 UGCGQ16739 394 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 B3GNT9Q6UX72 402 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 MRPL10Q7Z7H8 261 aaKnown RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 GPR65Q8IYL9 337 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 FAM186BQ8IYM0 893 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 HDAC7Q8WUI4 952 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 NXPE3Q969Y0 559 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 FDXACB1Q9BRP7 624 aaPredicted RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 NRDE2Q9H7Z3 1164 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 MRPL17Q9NRX2 175 aaKnown RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 GCNT4Q9P109 453 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 TTC7AQ9ULT0 858 aaPredicted RBP10.29□□□□□ -0.76
TTC39A-201ENST00000262675 FRMD4BQ9Y2L6 1034 aa10.29□□□□□ -0.76
TTC39A-201ENST00000262675 SRRM3A6NNA2 597 aaPredicted RBP10.28□□□□□ -0.76
TTC39A-201ENST00000262675 TGFB1I1O43294 461 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 ALDH2P05091 517 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 AXLP30530 894 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 DCAF17Q5H9S7 520 aaPredicted RBP10.28□□□□□ -0.76
TTC39A-201ENST00000262675 CFAP58Q5T655 872 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 TCERG1LQ5VWI1 586 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 LRIG3Q6UXM1 1119 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 LRRC31Q6UY01 552 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 ZNF720Q7Z2F6 126 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 SRLQ86TD4 932 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 RHPN2Q8IUC4 686 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 RASGEF1CQ8N431 466 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 MYCT1Q8N699 235 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 LRRC45Q96CN5 670 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 NAP1L3Q99457 506 aaPredicted RBP10.28□□□□□ -0.76
TTC39A-201ENST00000262675 RUSC1Q9BVN2 902 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 TIPINQ9BVW5 301 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 ISCUQ9H1K1 167 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 SEMA4AQ9H3S1 761 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 SLITRK6Q9H5Y7 841 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 SIX2Q9NPC8 291 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 DMAC2Q9NW81 257 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 ZDBF2Q9HCK1 2354 aa10.28□□□□□ -0.76
TTC39A-201ENST00000262675 PLXNA3P51805 1871 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms