RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 LRRN4CLQ8ND94 238 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 OTULINQ96BN8 352 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 APOL4Q9BPW4 351 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 DDX50Q9BQ39 737 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KIFC1Q9BW19 673 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 UPF3AQ9H1J1 476 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 EPB41L1Q9H4G0 881 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 HMGXB4Q9UGU5 601 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ARHGEF28Q8N1W1 1705 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SERPINB2P05120 415 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 TCIRG1Q13488 830 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF268Q14587 947 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 MAPK6Q16659 721 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KYNUQ16719 465 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM98CQ17RN3 349 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PERM1Q5SV97 790 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CATSPER4Q7RTX7 472 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF444Q8N0Y2 327 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 LRRC47Q8N1G4 583 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ENKURQ8TC29 256 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 BCL7CQ8WUZ0 217 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF75CPQ92670 426 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PFDN2Q9UHV9 154 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 C6orf229H3BNL8 230 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 DNM1LO00429 736 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ZBTB11O95625 1053 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 A1BGP04217 495 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CYP1A2P05177 515 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 DLATP10515 647 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC9A1P19634 815 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 CES1P23141 567 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 NAB1Q13506 487 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KNOP1Q1ED39 458 aaKnown RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 INSCQ1MX18 579 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM173BQ6P4H8 233 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 ZSCAN29Q8IWY8 852 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 KBTBD7Q8WVZ9 684 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SSX3Q99909 188 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 GPHNQ9NQX3 736 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 GINM1Q9NU53 330 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC39A1Q9NY26 324 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 PRKAG2Q9UGJ0 569 aa7.04□□□□□ -1.28
PDGFRA-201ENST00000257290 MROH5Q6ZUA9 1318 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CD9P21926 228 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 FUT4P22083 530 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 RTP1P59025 263 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 GSTM4Q03013 218 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CTDSPL2Q05D32 466 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 NR1H3Q13133 447 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 LONRF1Q17RB8 773 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TRMT5Q32P41 509 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TSGA10IPQ3SY00 556 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF568Q3ZCX4 644 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 NAALADL2Q58DX5 795 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ZC3H12BQ5HYM0 836 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SCARA3Q6AZY7 606 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 AAGABQ6PD74 315 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 UNC13DQ70J99 1090 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ASCC1Q8N9N2 400 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 LILRB4Q8NHJ6 448 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 NSL1Q96IY1 281 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 BPIFA3Q9BQP9 254 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PIDD1Q9HB75 910 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PPARGC1AQ9UBK2 798 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 DNAJB4Q9UDY4 337 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 GNPTGQ9UJJ9 305 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SNX14Q9Y5W7 946 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 IQSEC2Q5JU85 1478 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PNMA6EA0A0J9YXQ4 647 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 WRBO00258 174 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 SLC4A1P02730 911 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 POLGP54098 1239 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 AMPD2Q01433 879 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 PUM3Q15397 648 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 MAPK11Q15759 364 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CCDC58Q4VC31 144 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 FAM76BQ5HYJ3 339 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 HECTD3Q5T447 861 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TTC33Q6PID6 262 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ZNF598Q86UK7 904 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 MICALL2Q8IY33 904 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 NOA1Q8NC60 698 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 LBHD1Q9BQE6 289 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 DBNDD1Q9H9R9 158 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 BMP2KQ9NSY1 1161 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 COPG2Q9UBF2 871 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 RUVBL2Q9Y230 463 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 RGS12O14924 1447 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 C9IYK1 514 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 NADKO95544 446 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 RPN1P04843 607 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 CASP2P42575 452 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 ABATP80404 500 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 MOGSQ13724 837 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 E2F2Q14209 437 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TRIP13Q15645 432 aaPredicted RBP7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 VWA3BQ502W6 1294 aa7.03□□□□□ -1.28
PDGFRA-201ENST00000257290 TCP11X2Q5H9J9 407 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms