RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 EFL1Q7Z2Z2 1120 aaKnown RBP14.08□□□□□ -0.15
PRPF38A-201ENST00000257181 NOP9Q86U38 636 aaKnown RBP14.08□□□□□ -0.15
PRPF38A-201ENST00000257181 ADSSL1Q8N142 457 aa14.08□□□□□ -0.15
PRPF38A-201ENST00000257181 STMN2Q93045 179 aa14.08□□□□□ -0.15
PRPF38A-201ENST00000257181 SIK2Q9H0K1 926 aa14.08□□□□□ -0.15
PRPF38A-201ENST00000257181 CDH9Q9ULB4 789 aa14.08□□□□□ -0.15
PRPF38A-201ENST00000257181 NDUFA10O95299 355 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 NPEPPSP55786 919 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 IL9RQ01113 521 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 CNKSR3Q6P9H4 555 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 ARL8AQ96BM9 186 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 TEX12Q9BXU0 123 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 NDEL1Q9GZM8 345 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 PORCNQ9H237 461 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 DDX41Q9UJV9 622 aaKnown RBP14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 AK9Q5TCS8 1911 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 C2CD2LO14523 706 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 IRF1P10914 325 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 CTNNA1P35221 906 aaKnown RBP14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 GLUD2P49448 558 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 NAPEPLDQ6IQ20 393 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 NWD2Q9ULI1 1742 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 GTPBP10A4D1E9 387 aaKnown RBP14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 ZMYND10O75800 440 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 LYPLA2O95372 231 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 ADH1CP00326 375 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 MMP3P08254 477 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 TGM3Q08188 693 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 GJC2Q5T442 439 aaPredicted RBP14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 SMYD5Q6GMV2 418 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 SPATA18Q8TC71 538 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 HDAC6Q9UBN7 1215 aa14.08□□□□□ -0.16
PRPF38A-201ENST00000257181 RPN2P04844 631 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 POLR2LP62875 67 aaKnown RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 KRT71Q3SY84 523 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 CCNJLQ8IV13 435 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 WHAMMQ8TF30 809 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 NMRK1Q9NWW6 199 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 BARX2Q9UMQ3 279 aaPredicted RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 C1QTNF3-AMACRE9PGA6 284 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 CDH6P55285 790 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 TAS2R42Q7RTR8 314 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 PYROXD1Q8WU10 500 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 NLNQ9BYT8 704 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 ATXN3LQ9H3M9 355 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 TLE6Q9H808 572 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 AGPAT3Q9NRZ7 376 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 KCTD5Q9NXV2 234 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 DNAJC6O75061 913 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 SMIM24O75264 130 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 ASS1P00966 412 aaKnown RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 FDFT1P37268 417 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 PTGER2P43116 358 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 BRSK2Q8IWQ3 736 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 BSNDQ8WZ55 320 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 ULK4Q96C45 1275 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 KDM4CQ9H3R0 1056 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 WDCPQ9H6R7 721 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 MRPL40Q9NQ50 206 aaKnown RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 TOPAZ1Q8N9V7 1692 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 H2AFYO75367 372 aaKnown RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 MT-ND3P03897 115 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 USP17L7P0C7H9 530 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 CYP3A5P20815 502 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 DPYDQ12882 1025 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 PTK6Q13882 451 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 CXCL17Q6UXB2 119 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 VCX3BQ9H321 246 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 MRPS23Q9Y3D9 190 aaKnown RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 PTCH2Q9Y6C5 1203 aa14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 PHRF1Q9P1Y6 1649 aaKnown RBP14.07□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRIQ3A6PVS8 624 aaPredicted RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 RHOCP08134 193 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 CCL5P13501 91 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 KCNA4P22459 653 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 SGCGQ13326 291 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 DPCR1Q3MIW9 517 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 ZNF697Q5TEC3 545 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 SPATS2Q86XZ4 545 aaKnown RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 DZANK1Q9NVP4 752 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 AAR2Q9Y312 384 aaKnown RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 C2CD2Q9Y426 696 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 PCDHA2Q9Y5H9 948 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 LARGE1O95461 756 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 NCAM1P13591 858 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 DNAJB2P25686 324 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 HSPA9P38646 679 aaKnown RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 DYNLT1P63172 113 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 SULT2A1Q06520 285 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 TTC19Q6DKK2 380 aaPredicted RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 TSHZ1Q6ZSZ6 1077 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 SDCCAG3Q96C92 435 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 CLGNO14967 610 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 LZTS3O60299 673 aaPredicted RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 RBBP5Q15291 538 aaKnown RBP14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 LRRC49Q8IUZ0 686 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 MAML3Q96JK9 1138 aa14.06□□□□□ -0.16
PRPF38A-201ENST00000257181 ADGRE3Q9BY15 652 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms