RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 USP32Q8NFA0 1604 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 HMOX2P30519 316 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 GEMIN4P57678 1058 aaKnown RBP11.12□□□□□ -0.63
PUM1-201ENST00000257075 MDH1BQ5I0G3 518 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 RRM2BQ7LG56 351 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 ATP11CQ8NB49 1132 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 SYT15Q9BQS2 421 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 ARHGEF38Q9NXL2 777 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 SYNPO2Q9UMS6 1093 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 SPDYE5A6NIY4 337 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 CFLARO15519 480 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 ZBTB48P10074 688 aaPredicted RBP11.12□□□□□ -0.63
PUM1-201ENST00000257075 STK4Q13043 487 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 CUL2Q13617 745 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 SMAD1Q15797 465 aaKnown RBP11.12□□□□□ -0.63
PUM1-201ENST00000257075 SPDYE7PQ495Y7 208 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.12□□□□□ -0.63
PUM1-201ENST00000257075 IPMKQ8NFU5 416 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 CAPS2Q9BXY5 557 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 MED4Q9NPJ6 270 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 AGPAT3Q9NRZ7 376 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 BOLA3Q53S33 107 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 RETSATQ6NUM9 610 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 ANKRD23Q86SG2 305 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 DHX40Q8IX18 779 aaKnown RBP11.12□□□□□ -0.63
PUM1-201ENST00000257075 ADSSL1Q8N142 457 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 ENGASEQ8NFI3 743 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 PTPRN2Q92932 1015 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 RUSC1Q9BVN2 902 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 FAM96AQ9H5X1 160 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 NMRK2Q9NPI5 230 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 SLC9A3R1O14745 358 aaPredicted RBP11.12□□□□□ -0.63
PUM1-201ENST00000257075 UCHL3P15374 230 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 AKAP5P24588 427 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 MFSD4BQ5TF39 518 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 PKN3Q6P5Z2 889 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 FAM129AQ9BZQ8 928 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 FBXO10Q9UK96 956 aa11.12□□□□□ -0.63
PUM1-201ENST00000257075 MRPS23Q9Y3D9 190 aaKnown RBP11.12□□□□□ -0.63
PUM1-201ENST00000257075 TTC26A0AVF1 554 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 FOXN1O15353 648 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 ADH1AP07327 375 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 FGFR4P22455 802 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 ARSEP51690 589 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 MAP3K7CLP57077 242 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 RHOAP61586 193 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 MTA1Q13330 715 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 CCDC38Q502W7 563 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 PALB2Q86YC2 1186 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 PHACTR4Q8IZ21 702 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 OTUB1Q96FW1 271 aaPredicted RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 HIPK3Q9H422 1215 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 RIOX1Q9H6W3 641 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 NPM3O75607 178 aaKnown RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 APRTP07741 180 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 OCM2P0CE71 109 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 OCMP0CE72 109 aaPredicted RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 ELNP15502 786 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 FAM110CQ1W6H9 321 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 TTLL9Q3SXZ7 439 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 MAML1Q92585 1016 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 UPF3AQ9H1J1 476 aaKnown RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 GIMAP4Q9NUV9 329 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 L3MBTL1Q9Y468 752 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 TIMM13Q9Y5L4 95 aaPredicted RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 HEATR9A2RTY3 570 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 ZBED8Q8IZ13 594 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 CLMNQ96JQ2 1002 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 PDGFDQ9GZP0 370 aaPredicted RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 CYP3A43Q9HB55 503 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 SCUBE2Q9NQ36 999 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 MAN1C1Q9NR34 630 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 SMPD4Q9NXE4 827 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 ITGA11Q9UKX5 1188 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 NFASCO94856 1347 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 C2orf81A6NN90 581 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 ADCY6O43306 1168 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 TOMM70O94826 608 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 RTN3O95197 1032 aaPredicted RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 PPP3CCP48454 512 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 SLC45A4Q5BKX6 768 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 C7orf61Q8IZ16 206 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 ZNF557Q8N988 423 aaPredicted RBP11.11□□□□□ -0.63
PUM1-201ENST00000257075 C1orf54Q8WWF1 131 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 PGLYRP2Q96PD5 576 aa11.11□□□□□ -0.63
PUM1-201ENST00000257075 UMODL1Q5DID0 1318 aa11.1□□□□□ -0.63
PUM1-201ENST00000257075 NDUFS2O75306 463 aa11.1□□□□□ -0.63
PUM1-201ENST00000257075 PPIGQ13427 754 aaKnown RBP eCLIP11.1□□□□□ -0.636e-7■■□□□ 11.5
PUM1-201ENST00000257075 ZBTB41Q5SVQ8 909 aa11.1□□□□□ -0.63
PUM1-201ENST00000257075 C15orf52Q6ZUT6 534 aaKnown RBP11.1□□□□□ -0.63
PUM1-201ENST00000257075 TRAPPC12Q8WVT3 735 aa11.1□□□□□ -0.63
PUM1-201ENST00000257075 SERPINI1Q99574 410 aa11.1□□□□□ -0.63
PUM1-201ENST00000257075 BPIFA3Q9BQP9 254 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms