RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 TTLL13PA6NNM8 815 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 PRKCBP05771 671 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 TARSP26639 723 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 NAMPTP43490 491 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 OTUD4Q01804 1114 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 SMAD1Q15797 465 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 CEP128Q6ZU80 1094 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 KATNAL2Q8IYT4 538 aa13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 MRPL4Q9BYD3 311 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 C12orf65Q9H3J6 166 aaKnown RBP13.29□□□□□ -0.28
RAB3IP-201ENST00000247833 A0A0G2JND7 137 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 PTPRAP18433 802 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 KRT4P19013 534 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 TCF7P36402 384 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 XRCC4Q13426 336 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 FAM160B1Q5W0V3 765 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF772Q68DY9 489 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 ANKRD36BP1Q96IX9 119 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 TMEM237Q96Q45 408 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 LRRC37BQ96QE4 947 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 PORCNQ9H237 461 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 POLIQ9UNA4 740 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 DNALI1O14645 258 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 LIASO43766 372 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 IVDP26440 423 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 MSH2P43246 934 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 CTCFP49711 727 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 SESN3P58005 492 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 LACTB2Q53H82 288 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 FYB2Q5VWT5 728 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 TRIM68Q6AZZ1 485 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 XRRA1Q6P2D8 792 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 C3orf62Q6ZUJ4 267 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 GBP7Q8N8V2 638 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 FAM71DQ8N9W8 422 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 SLITRK1Q96PX8 696 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 PLCD4Q9BRC7 762 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 TMEM109Q9BVC6 243 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 NIF3L1Q9GZT8 377 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 NPHS2Q9NP85 383 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 HOXC10Q9NYD6 342 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 SIPA1L1O43166 1804 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 F5H423 210 aaPredicted RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 PMM2O15305 246 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 CAPSQ13938 189 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 LY6KQ17RY6 165 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 TFDP3Q5H9I0 405 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 DARS2Q6PI48 645 aaKnown RBP13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 LVRNQ6Q4G3 990 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 DLK2Q6UY11 383 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 FITM2Q8N6M3 262 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 TJP2Q9UDY2 1190 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 PHTF1Q9UMS5 762 aa13.28□□□□□ -0.28
RAB3IP-201ENST00000247833 CFAP73A6NFT4 308 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 DIAPH2O60879 1101 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 PHBP35232 272 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 RFC1P35251 1148 aaPredicted RBP13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 NRLP54845 237 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 NCALDP61601 193 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 TFDP1Q14186 410 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF667Q5HYK9 610 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 SWT1Q5T5J6 900 aaKnown RBP13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 CCHCR1Q8TD31 782 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 TTC17Q96AE7 1141 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 MAGEB18Q96M61 343 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 HAPLN2Q9GZV7 340 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 METTL5Q9NRN9 209 aaKnown RBP13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 HAO1Q9UJM8 370 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 HEY1Q9Y5J3 304 aa13.27□□□□□ -0.28
RAB3IP-201ENST00000247833 A0A1W2PPM1 405 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 ATP2A2P16615 1042 aaKnown RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 RPA3P35244 121 aaPredicted RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 EFTUD2Q15029 972 aaKnown RBP eCLIP13.27□□□□□ -0.299e-7■■■■■ 28.2
RAB3IP-201ENST00000247833 EAPPQ56P03 285 aaPredicted RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 OR6B2Q6IFH4 312 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 PDIK1LQ8N165 341 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 TMEM130Q8N3G9 435 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 KAT6AQ92794 2004 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 CFAP36Q96G28 342 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 HEXIM2Q96MH2 286 aaKnown RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 TEPSINQ96N21 525 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 CXorf56Q9H5V9 222 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 MCF2LO15068 1137 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 PGK2P07205 417 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 ACO1P21399 889 aaKnown RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 CDC25CP30307 473 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 GCLCP48506 637 aaPredicted RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 ERFP50548 548 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 ARL4CP56559 192 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 GAD2Q05329 585 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 TCEAL1Q15170 157 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 ACCSLQ4AC99 568 aa13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 FAM102AQ5T9C2 384 aaPredicted RBP13.27□□□□□ -0.29
RAB3IP-201ENST00000247833 FAXCQ5TGI0 409 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms