RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 BTNL9Q6UXG8 535 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 KCTD1Q719H9 257 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 RRAGAQ7L523 313 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 CACNA2D4Q7Z3S7 1137 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 KRT27Q7Z3Y8 459 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 GSTCDQ8NEC7 633 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ETNPPLQ8TBG4 499 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 EEF2KMTQ96G04 330 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 MMS19Q96T76 1030 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 KCTD10Q9H3F6 313 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 PCMTD2Q9NV79 361 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ERVK13-1Q9NX77 482 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 TMEM59LQ9UK28 342 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 ZNF281Q9Y2X9 895 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 HYOU1Q9Y4L1 999 aa8.56□□□□□ -1.04
CXCR4-201ENST00000241393 SIPA1L1O43166 1804 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 ATAD5Q96QE3 1844 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 ARFGEF1Q9Y6D6 1849 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 H3BQF6 201 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 CETN3O15182 167 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 EPHB6O15197 1021 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 GSTA4O15217 222 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 ENTPD3O75355 529 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 CYP3A4P08684 503 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 C6orf222P0C671 652 aaPredicted RBP8.55□□□□□ -1.04
CXCR4-201ENST00000241393 CD8BP10966 210 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 RAC2P15153 192 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 SPINK2P20155 84 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 SOX5P35711 763 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 ICA1Q05084 483 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 SPIRE1Q08AE8 756 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 BMT2Q1RMZ1 405 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 HSP90B2PQ58FF3 399 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 HERC4Q5GLZ8 1057 aaPredicted RBP8.55□□□□□ -1.04
CXCR4-201ENST00000241393 MUM1L1Q5H9M0 696 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 DACT2Q5SW24 774 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 SFMBT2Q5VUG0 894 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 UBE2R2Q712K3 238 aaPredicted RBP8.55□□□□□ -1.04
CXCR4-201ENST00000241393 FRMD5Q7Z6J6 570 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 GPBP1Q86WP2 473 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 PPM1KQ8N3J5 372 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 SYT2Q8N9I0 419 aaPredicted RBP8.55□□□□□ -1.04
CXCR4-201ENST00000241393 CAGE1Q8TC20 777 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 SCFD1Q8WVM8 642 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 NOX5Q96PH1 765 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 PDE11AQ9HCR9 933 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 PLCB1Q9NQ66 1216 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 AIPL1Q9NZN9 384 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 HDAC6Q9UBN7 1215 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 TRAF3IP3Q9Y228 551 aa8.55□□□□□ -1.04
CXCR4-201ENST00000241393 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.55□□□□□ -1.04
CXCR4-201ENST00000241393 TIMM13Q9Y5L4 95 aaPredicted RBP8.55□□□□□ -1.04
CXCR4-201ENST00000241393 MACROD2A1Z1Q3 448 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 BTNL10A8MVZ5 291 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 E9PMD0 336 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 F5H6K3 240 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 PLSCR1O15162 318 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
CXCR4-201ENST00000241393 WNT11O96014 354 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 TFRCP02786 760 aaKnown RBP8.54□□□□□ -1.04
CXCR4-201ENST00000241393 PLEKP08567 350 aaPredicted RBP8.54□□□□□ -1.04
CXCR4-201ENST00000241393 MUTP22033 750 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 FUT4P22083 530 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 GUCY1A3Q02108 690 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 KLRC3Q07444 240 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 LRRC41Q15345 812 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 GLE1Q53GS7 698 aaKnown RBP8.54□□□□□ -1.04
CXCR4-201ENST00000241393 TM4SF20Q53R12 229 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 FAM83BQ5T0W9 1011 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 C10orf76Q5T2E6 689 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 SYDE2Q5VT97 1194 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 USP17L6PQ6QN14 398 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 KRT26Q7Z3Y9 468 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 ANKRD13AQ8IZ07 590 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 POLR3CQ9BUI4 534 aaPredicted RBP8.54□□□□□ -1.04
CXCR4-201ENST00000241393 JADE2Q9NQC1 790 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 ADAM21Q9UKJ8 722 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 DNM3Q9UQ16 869 aa8.54□□□□□ -1.04
CXCR4-201ENST00000241393 BZW2Q9Y6E2 419 aaKnown RBP8.54□□□□□ -1.04
CXCR4-201ENST00000241393 COL11A2P13942 1736 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 BLACEA4D250 179 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 FITM1A5D6W6 292 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 DDTLA6NHG4 134 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 PDXKO00764 312 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 SLC16A3O15427 465 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CALUO43852 315 aaPredicted RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 SRGAP2O75044 1071 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 MED24O75448 989 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 NOL4O94818 638 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 NPTXRO95502 500 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 NDUFB10O96000 172 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 KRT18P05783 430 aaKnown RBP8.53□□□□□ -1.04
CXCR4-201ENST00000241393 GAP43P17677 238 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 TNFRSF8P28908 595 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 IGFALSP35858 605 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 PAFAH1B1P43034 410 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 CORO7P57737 925 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 SLC15A2Q16348 729 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 NFIL3Q16649 462 aa8.53□□□□□ -1.04
CXCR4-201ENST00000241393 KNOP1Q1ED39 458 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms