RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 DDNO94850 711 aaPredicted RBP14.28□□□□□ -0.12
RAB3D-201ENST00000222120 UBOX5O94941 541 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 CYP1A2P05177 515 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
RAB3D-201ENST00000222120 ARL4AP40617 200 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 CENPCQ03188 943 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 ZACNQ401N2 412 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 ZNF572Q7Z3I7 529 aaPredicted RBP14.28□□□□□ -0.12
RAB3D-201ENST00000222120 COPEO14579 308 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 CREB3O43889 395 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 PECAM1P16284 738 aaPredicted RBP14.28□□□□□ -0.12
RAB3D-201ENST00000222120 KRT4P19013 534 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 AUHQ13825 339 aaKnown RBP14.28□□□□□ -0.12
RAB3D-201ENST00000222120 EXOC8Q8IYI6 725 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 LRRC4Q9HBW1 653 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 NINJ2Q9NZG7 142 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 ANKRD36CQ5JPF3 1778 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 BANF1O75531 89 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 CCNG2Q16589 344 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 CYB5D1Q6P9G0 228 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 PPFIBP2Q8ND30 876 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 CFAP61Q8NHU2 1237 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 LRRN4Q8WUT4 740 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 ATP2A3Q93084 1043 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 HPDLQ96IR7 371 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 ACAP3Q96P50 834 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 MARCOQ9UEW3 520 aaPredicted RBP14.28□□□□□ -0.12
RAB3D-201ENST00000222120 PCYOX1Q9UHG3 505 aa14.28□□□□□ -0.12
RAB3D-201ENST00000222120 IQANK1A0A1B0GTG1 560 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 PSTPIP1O43586 416 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 ADCY3O60266 1144 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 LPXNO60711 386 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 SSTR1P30872 391 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 MAMLD1Q13495 774 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 LVRNQ6Q4G3 990 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 SPOCD1Q6ZMY3 1216 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 ATXN7L3BQ96GX2 97 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 FHDC1Q9C0D6 1143 aaPredicted RBP14.27□□□□□ -0.12
RAB3D-201ENST00000222120 SPATC1LQ9H0A9 340 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 SMARCAD1Q9H4L7 1026 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 SMYD2Q9NRG4 433 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 ZNF536O15090 1300 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 A0A087WZ62 844 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 E2F8A0AVK6 867 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 CST3P01034 146 aaPredicted RBP14.27□□□□□ -0.12
RAB3D-201ENST00000222120 TMEM132DQ14C87 1099 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 TFDP3Q5H9I0 405 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 MOB2Q70IA6 237 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 GBP7Q8N8V2 638 aaPredicted RBP14.27□□□□□ -0.12
RAB3D-201ENST00000222120 EXD1Q8NHP7 514 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 SREK1Q8WXA9 508 aaKnown RBP14.27□□□□□ -0.12
RAB3D-201ENST00000222120 FDXACB1Q9BRP7 624 aaPredicted RBP14.27□□□□□ -0.12
RAB3D-201ENST00000222120 TXLNGQ9NUQ3 528 aa14.27□□□□□ -0.12
RAB3D-201ENST00000222120 MYH1P12882 1939 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 O00370 1275 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 IGF2BP3O00425 579 aaKnown RBP eCLIP14.27□□□□□ -0.13
RAB3D-201ENST00000222120 ONECUT3O60422 494 aaPredicted RBP14.27□□□□□ -0.13
RAB3D-201ENST00000222120 CREB1P16220 341 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 AP3M2P53677 418 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 KLC2Q9H0B6 622 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 PORCNQ9H237 461 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 XPNPEP1Q9NQW7 623 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 NOCTQ9UK39 431 aaKnown RBP14.27□□□□□ -0.13
RAB3D-201ENST00000222120 NOD1Q9Y239 953 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 STXBP5LQ9Y2K9 1186 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 TELO2Q9Y4R8 837 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.13
RAB3D-201ENST00000222120 DRP2Q13474 957 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 CCDC14Q49A88 953 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 SAMD3Q8N6K7 520 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 TRPM4Q8TD43 1214 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 CRYGNQ8WXF5 182 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 PIK3R5Q8WYR1 880 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 GEMIN8Q9NWZ8 242 aaKnown RBP14.27□□□□□ -0.13
RAB3D-201ENST00000222120 ZFP69BQ9UJL9 534 aa14.27□□□□□ -0.13
RAB3D-201ENST00000222120 CCDC78A2IDD5 438 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 ADM5C9JUS6 153 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 SHOX2O60902 331 aaPredicted RBP14.26□□□□□ -0.13
RAB3D-201ENST00000222120 CIB2O75838 187 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 CFHP08603 1231 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 HIRAP54198 1017 aaPredicted RBP14.26□□□□□ -0.13
RAB3D-201ENST00000222120 SESN2P58004 480 aaPredicted RBP14.26□□□□□ -0.13
RAB3D-201ENST00000222120 NME3Q13232 169 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 MUM1Q2TAK8 710 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 MDH1BQ5I0G3 518 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 PGM2Q96G03 612 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 SUFUQ9UMX1 484 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 ATRNL1Q5VV63 1379 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 GRIN2DO15399 1336 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 ADGRA3Q8IWK6 1321 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 CAPSQ13938 189 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 PCGF5Q86SE9 256 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 PDCD7Q8N8D1 485 aaKnown RBP14.26□□□□□ -0.13
RAB3D-201ENST00000222120 DEPDC1BQ8WUY9 529 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 SGSM3Q96HU1 749 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 TRIM55Q9BYV6 548 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 UBN1Q9NPG3 1134 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 PPARGC1AQ9UBK2 798 aaKnown RBP14.26□□□□□ -0.13
RAB3D-201ENST00000222120 PDE4DIPQ5VU43 2346 aa14.26□□□□□ -0.13
RAB3D-201ENST00000222120 KRT37O76014 449 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms