RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PRKCZQ05513 592 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 GABPB1Q06547 395 aaPredicted RBP18.43■□□□□ 0.54
VRK1-201ENST00000216639 PIGHQ14442 188 aaPredicted RBP18.43■□□□□ 0.54
VRK1-201ENST00000216639 TMEM130Q8N3G9 435 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 DDX27Q96GQ7 796 aaKnown RBP18.43■□□□□ 0.54
VRK1-201ENST00000216639 MCEEQ96PE7 176 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 DNAI2Q9GZS0 605 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 ERVK-5Q9HDB9 667 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 PARP2Q9UGN5 583 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 PCYOX1Q9UHG3 505 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 USTQ9Y2C2 406 aa18.43■□□□□ 0.54
VRK1-201ENST00000216639 TCRBV5S1A1TA0A578 114 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 BHMG1C9JSJ3 638 aaPredicted RBP18.42■□□□□ 0.54
VRK1-201ENST00000216639 M0QYV0 167 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 FSCN2O14926 492 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 MICAL2O94851 1124 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 PGK1P00558 417 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 CYP1B1Q16678 543 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 NBPF20Q3BBV1 942 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 CXCL17Q6UXB2 119 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 KATNAL2Q8IYT4 538 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 PRELID2Q8N945 189 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 FAM71BQ8TC56 605 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 SEC14L1Q92503 715 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 C18orf8Q96DM3 657 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 ZNF560Q96MR9 790 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 MIS12Q9H081 205 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 TUBGCP4Q9UGJ1 667 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 HMGXB4Q9UGU5 601 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 TRPV2Q9Y5S1 764 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 SNX9Q9Y5X1 595 aa18.42■□□□□ 0.54
VRK1-201ENST00000216639 GOLGA6BA6NDN3 693 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 PODXLO00592 558 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 KCNE1P15382 129 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 AKAP5P24588 427 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 PNPLA4P41247 253 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 GSCP56915 257 aaPredicted RBP18.41■□□□□ 0.54
VRK1-201ENST00000216639 RPL7AP62424 266 aaKnown RBP18.41■□□□□ 0.54
VRK1-201ENST00000216639 ORC1Q13415 861 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 PTPN20Q4JDL3 420 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 UBXN11Q5T124 520 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 ALS2CLQ60I27 953 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 TWF2Q6IBS0 349 aaKnown RBP18.41■□□□□ 0.54
VRK1-201ENST00000216639 CCDC50Q8IVM0 306 aa18.41■□□□□ 0.54
VRK1-201ENST00000216639 C12orf50Q8NA57 414 aaPredicted RBP18.41■□□□□ 0.54
VRK1-201ENST00000216639 SMIM28A0A1B0GU29 152 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 SIGLEC16A6NMB1 481 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 O00370 1275 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 HSF2BPO75031 334 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 KRT3P12035 628 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 GBP1P32455 592 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 FNTAP49354 379 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 PSMC1P62191 440 aaKnown RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 ZNF268Q14587 947 aaPredicted RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 XKR4Q5GH76 650 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 FAM47CQ5HY64 1035 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 GLRA4Q5JXX5 417 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 PPP1R15BQ5SWA1 713 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 CYP4A22Q5TCH4 519 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 LRRC38Q5VT99 294 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 C9orf57Q5W0N0 161 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 CCDC137Q6PK04 289 aaKnown RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 MREGQ8N565 214 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 NIPA2Q8N8Q9 360 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 EXD1Q8NHP7 514 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 IPO4Q8TEX9 1081 aaKnown RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 C18orf25Q96B23 403 aaPredicted RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 ERP44Q9BS26 406 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 XPNPEP3Q9NQH7 507 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 IPPQ9Y573 584 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 CDY2AQ9Y6F7 541 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 KIF3CO14782 793 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 GJB6O95452 261 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 RARAP10276 462 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 CYP3A5P20815 502 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 SP3Q02447 781 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 CACNB2Q08289 660 aaPredicted RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 ODF2Q5BJF6 829 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 LCLAT1Q6UWP7 414 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 FAM228AQ86W67 206 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 UNC93AQ86WB7 457 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 JAMLQ86YT9 394 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 HACE1Q8IYU2 909 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 RBM41Q96IZ5 413 aaKnown RBP18.4■□□□□ 0.54
VRK1-201ENST00000216639 RUFY1Q96T51 708 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 LRRC19Q9H756 370 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 HOMER3Q9NSC5 361 aa18.4■□□□□ 0.54
VRK1-201ENST00000216639 TRIP12Q14669 1992 aaPredicted RBP18.39■□□□□ 0.53
VRK1-201ENST00000216639 GOLGA8SH3BPF8 625 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 H3BQF6 201 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 POLR3GO15318 223 aaPredicted RBP18.39■□□□□ 0.53
VRK1-201ENST00000216639 DAPK3O43293 454 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 COILP38432 576 aaPredicted RBP18.39■□□□□ 0.53
VRK1-201ENST00000216639 TAS2R40P59535 323 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 FBXO47Q5MNV8 452 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 DPH6Q7L8W6 267 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 CCDC105Q8IYK2 499 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 RCOR2Q8IZ40 523 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 GOLGA6L1Q8N7Z2 621 aa18.39■□□□□ 0.53
VRK1-201ENST00000216639 FNIP1Q8TF40 1166 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms