RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Rhot1Q8BG51 631 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Actl9Q8CG27 415 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Kdm1bQ8CIG3 826 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tbc1d13Q8R3D1 400 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 MlxiplQ99MZ3 864 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Cep19Q9CQA8 163 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Med7Q9CZB6 233 aa16.77■□□□□ 0.27
Trim39-203ENSMUST00000113706 Acp4D3YTS9 425 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm20503G3UZK1 150 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 PtgisO35074 501 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ctnnd1P30999 938 aaKnown RBP16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 PgfP49764 158 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pon1P52430 355 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Prdx5P99029 210 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ttc9Q3V038 219 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Zbtb8osQ505B7 168 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 CybbQ61093 570 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 SowahaQ8BLS7 548 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tdrd7Q8K1H1 1086 aaKnown RBP16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Snap47Q8R570 413 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Fkbp6Q91XW8 327 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Chst12Q99LL3 419 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 GgcxQ9QYC7 757 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Aimp1P31230 310 aaKnown RBP16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 SftpdP50404 374 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Aoc2Q812C9 757 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 E330017A01RikQ8BU47 192 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Spata16Q8C636 571 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Bclaf1Q8K019 919 aaKnown RBP16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Kctd15Q8K0E1 283 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Iqsec1Q8R0S2 961 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gimap4Q99JY3 219 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 Myo16Q5DU14 1919 aa16.76■□□□□ 0.27
Trim39-203ENSMUST00000113706 0610012G03RikA0A0J9YTR2 95 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Olfr391-psA0A0U1RNJ4 312 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 2010300C02RikE9Q3M9 1175 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Hoxc8P09025 242 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Slc26a2Q62273 739 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Klra3Q64329 266 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 IqceQ6PCQ0 778 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Trib2Q8K4K3 343 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Setd3Q91WC0 594 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 YarsQ91WQ3 528 aaKnown RBP16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Wdr83Q9DAJ4 315 aaKnown RBP16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tldc2A2ACG1 198 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Lrrc73B2RWC4 316 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pcbp1P60335 356 aaKnown RBP16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Nek10Q3UGM2 1111 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Nlrc4Q3UP24 1024 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Rassf10Q8BL43 508 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Rsad2Q8CBB9 362 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Adgrg3Q8R0T6 542 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Dhx58Q99J87 678 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Slc25a11Q9CR62 314 aaKnown RBP16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gstt4Q9D4P7 240 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Sfmbt1Q9JMD1 863 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Myo1cQ9WTI7 1063 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Kcna3P16390 528 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Wfs1P56695 890 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 RalaP63321 206 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ppm1jQ149T7 507 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 ZufspQ3T9Z9 577 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mtus1Q5HZI1 1210 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Zbed4Q80WQ9 1168 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 HhatQ8BMT9 499 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Thap12Q9CUX1 758 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Lrrc71Q9D3W5 558 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Tmem174Q9DCX7 243 aa16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ddx24Q9ESV0 857 aaKnown RBP16.75■□□□□ 0.27
Trim39-203ENSMUST00000113706 Slc16a6B1AT66 607 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gm10488Q4KL05 212 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Avpr1aQ62463 423 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mrgprb8Q7TN51 330 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Q80ZQ3 298 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Fam160b1Q8CDM8 764 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Trap1Q9CQN1 706 aaKnown RBP16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Itgb3O54890 787 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ranbp1P34022 203 aaKnown RBP16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ugt1a2P70691 533 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 GaaP70699 953 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Bpifb5Q3UQ05 490 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ugt1a1Q63886 535 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mcoln2Q8K595 566 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pcyox1Q9CQF9 505 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Mageb3Q9D2H4 330 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pidd1Q9ERV7 915 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Cyp39a1Q9JKJ9 470 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 1700031M16RikA0A087WSH0 82 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Skint7A7XV04 395 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gjb3P28231 270 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Marcksl1P28667 200 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Psmc4P54775 418 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Ehbp1Q69ZW3 1231 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Armcx2Q6A058 784 aaKnown RBP16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Gpr151Q7TSN6 422 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Pum3Q8BKS9 647 aaKnown RBP16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Neto2Q8BNJ6 525 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Q8BZE1 841 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Svs3bQ8BZH8 265 aa16.74■□□□□ 0.27
Trim39-203ENSMUST00000113706 Uba3Q8C878 462 aa16.74■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms