RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-231	ENST00000640501	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	8.82	□□□□□ -1
PNKP-231	ENST00000640501	XYLT2	Q9H1B5	865 aa		8.82	□□□□□ -1
PNKP-231	ENST00000640501	MINDY3	Q9H8M7	445 aa		8.82	□□□□□ -1
PNKP-231	ENST00000640501	ACP6	Q9NPH0	428 aa		8.82	□□□□□ -1
PNKP-231	ENST00000640501	SETD4	Q9NVD3	440 aa		8.82	□□□□□ -1
PNKP-231	ENST00000640501	AMACR	Q9UHK6	382 aa		8.82	□□□□□ -1
PNKP-231	ENST00000640501	BARX2	Q9UMQ3	279 aa	Predicted RBP	8.82	□□□□□ -1
PNKP-231	ENST00000640501	UBQLN1	Q9UMX0	589 aa	Known RBP	8.82	□□□□□ -1
PNKP-231	ENST00000640501	GNE	Q9Y223	722 aa	Known RBP	8.82	□□□□□ -1
PNKP-231	ENST00000640501	CIT	O14578	2027 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	MBLAC1	A4D2B0	266 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	GOLGA6C	A6NDK9	693 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	TTLL13P	A6NNM8	815 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	FSCN2	O14926	492 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	TTI1	O43156	1089 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	RNF40	O75150	1001 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	RNF8	O76064	485 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	GJB1	P08034	283 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	MYL3	P08590	195 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	NFIC	P08651	508 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	SLC10A3	P09131	477 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	WEE2	P0C1S8	567 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	GOLGA6D	P0CG33	693 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	SETSIP	P0DME0	302 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	PYGM	P11217	842 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	DARS	P14868	501 aa	Known RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	HSPA9	P38646	679 aa	Known RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	CRYBB1	P53674	252 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	GSC	P56915	257 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	PTPN11	Q06124	597 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	ZNF211	Q13398	564 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	ZNF268	Q14587	947 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	CNGA2	Q16280	664 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	MARCH8	Q5T0T0	291 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	DCAF12L1	Q5VU92	463 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	C17orf99	Q6UX52	265 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	SCARA5	Q6ZMJ2	495 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	LEKR1	Q6ZMV7	388 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	POLN	Q7Z5Q5	900 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	UNC93A	Q86WB7	457 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	JAML	Q86YT9	394 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	NIPA2	Q8N8Q9	360 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	C1orf127	Q8N9H9	656 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	FNIP1	Q8TF40	1166 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	ALG3	Q92685	438 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	SLCO2A1	Q92959	643 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	C18orf8	Q96DM3	657 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	CPB2	Q96IY4	423 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	NT5C1A	Q9BXI3	368 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	FAM49A	Q9H0Q0	323 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	STMN4	Q9H169	189 aa	Predicted RBP	8.81	□□□□□ -1
PNKP-231	ENST00000640501	LRRC19	Q9H756	370 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	GOLGA6A	Q9NYA3	693 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	HESX1	Q9UBX0	185 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	AGAP1	Q9UPQ3	857 aa		8.81	□□□□□ -1
PNKP-231	ENST00000640501	TMEM191C	A6NGB0	347 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	SIGLEC16	A6NMB1	481 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	HMGB1P1	B2RPK0	211 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	DAPK3	O43293	454 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	DUSP11	O75319	330 aa	Known RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	CILP	O75339	1184 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	NPTXR	O95502	500 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ITGBL1	O95965	494 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	MYZAP	P0CAP1	466 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ZNF865	P0CJ78	1059 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	MYBL2	P10244	700 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	KRT3	P12035	628 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	CYP3A5	P20815	502 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	BRD2	P25440	801 aa	Known RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	COIL	P38432	576 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	GGCX	P38435	758 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	GUCY2F	P51841	1108 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	SLC8A3	P57103	927 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	DMTN	Q08495	405 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	IFFO1	Q0D2I5	559 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	INCA1	Q0VD86	236 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	FSCN1	Q16658	493 aa	Known RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	KIZ	Q2M2Z5	673 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	SLC10A6	Q3KNW5	377 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ZNF394	Q53GI3	561 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	TMEM63B	Q5T3F8	832 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	CST9	Q5W186	159 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ZNF365	Q70YC5	407 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ILDR2	Q71H61	639 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	SAPCD2	Q86UD0	394 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	HOOK3	Q86VS8	718 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ZDHHC17	Q8IUH5	632 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	GSPT2	Q8IYD1	628 aa	Known RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	CEP120	Q8N960	986 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	CCDC89	Q8N998	374 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	TTC13	Q8NBP0	860 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ATL2	Q8NHH9	583 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	UBLCP1	Q8WVY7	318 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	USP6NL	Q92738	828 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	KRT35	Q92764	455 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	HHIPL1	Q96JK4	782 aa		8.8	□□□□□ -1
PNKP-231	ENST00000640501	ZNF668	Q96K58	619 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	HEXIM2	Q96MH2	286 aa	Known RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	MTG1	Q9BT17	334 aa	Predicted RBP	8.8	□□□□□ -1
PNKP-231	ENST00000640501	FOXP3	Q9BZS1	431 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms