RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 KRT35Q92764 455 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 KCNK13Q9HB14 408 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 TBC1D7Q9P0N9 293 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 BTAF1O14981 1849 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 B2RBV5 119 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 FSCN2O14926 492 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 TM9SF1O15321 606 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 BAG2O95816 211 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 EIF2S1P05198 315 aaKnown RBP12.64□□□□□ -0.39
CAPN3-221ENST00000638141 GSTT2P0CG29 244 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 GSTT2BP0CG30 244 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 NAT1P18440 290 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CDH2P19022 906 aaPredicted RBP12.64□□□□□ -0.39
CAPN3-221ENST00000638141 PCSK6P29122 969 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 AQP4P55087 323 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ZBTB16Q05516 673 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CDK18Q07002 472 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 SNAPC2Q13487 334 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 MAPK6Q16659 721 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 SLC2A7Q6PXP3 512 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CENPUQ71F23 418 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 TBCKQ8TEA7 893 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 CASP10Q92851 521 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 SGF29Q96ES7 293 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 DNAJC18Q9H819 358 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 FETUBQ9UGM5 382 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 ASIC3Q9UHC3 531 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 SLC24A2Q9UI40 661 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 PTPN22Q9Y2R2 807 aa12.64□□□□□ -0.39
CAPN3-221ENST00000638141 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 USP17L12C9JPN9 530 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 USP17L21D6R901 530 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 FCHO1O14526 889 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 NFIL3Q16649 462 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 DEPDC1Q5TB30 811 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 C1orf146Q5VVC0 180 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 LVRNQ6Q4G3 990 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 RNF207Q6ZRF8 634 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 CHSY1Q86X52 802 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 OXNAD1Q96HP4 312 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 NAP1L4Q99733 375 aaKnown RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 TMEM120AQ9BXJ8 343 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 ANAPC5Q9UJX4 755 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 RAB26Q9ULW5 256 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 LZTS1Q9Y250 596 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 TDRKHQ9Y2W6 561 aaKnown RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 NEU2Q9Y3R4 380 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 CEPT1Q9Y6K0 416 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 EXOC1LA0A1B0GW35 172 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 TTLL13PA6NNM8 815 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 KRT38O76015 456 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 USP1O94782 785 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 APBA3O96018 575 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 DLDP09622 509 aaKnown RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 ATF2P15336 505 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 PPARGP37231 505 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 COG7P83436 770 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 BMT2Q1RMZ1 405 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 FBXL19Q6PCT2 694 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 C3orf67Q6ZVT6 689 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 TMC7Q7Z402 723 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 GLYCTKQ8IVS8 523 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 REXO1Q8N1G1 1221 aaKnown RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 SDR16C5Q8N3Y7 309 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 RBM15BQ8NDT2 890 aaKnown RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 PRPF31Q8WWY3 499 aaKnown RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 UBAP1Q9NZ09 502 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 GCNT4Q9P109 453 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 DCTN4Q9UJW0 460 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 AJAP1Q9UKB5 411 aaPredicted RBP12.63□□□□□ -0.39
CAPN3-221ENST00000638141 HEY1Q9Y5J3 304 aa12.63□□□□□ -0.39
CAPN3-221ENST00000638141 CYP2D7A0A087X1C5 515 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 SMCO2A6NFE2 343 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 GOLGA8TH3BQL2 631 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 GOLGA8HP0CJ92 632 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 COL6A2P12110 1019 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 FDFT1P37268 417 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 KCNJ1P48048 391 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 MARCKSL1P49006 195 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 CDK9P50750 372 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 FOLH1Q04609 750 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 RWDD4Q6NW29 188 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 ICA1LQ8NDH6 482 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 UPF1Q92900 1129 aaKnown RBP eCLIP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 ALKBH8Q96BT7 664 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 LBHD1Q9BQE6 289 aaPredicted RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 THAP2Q9H0W7 228 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 TAGLN3Q9UI15 199 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 SCN7AQ01118 1682 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 TNS1Q9HBL0 1735 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 A0A0G2JND7 137 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 CCDC160A6NGH7 325 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 SPECC1L-ADORA2AF8WAN1 911 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 NMT2O60551 498 aa12.62□□□□□ -0.39
CAPN3-221ENST00000638141 CCNT2O60583 730 aaKnown RBP12.62□□□□□ -0.39
CAPN3-221ENST00000638141 PHKA2P46019 1235 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms