RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 SIDT1Q9NXL6 827 aaKnown RBP5.23□□□□□ -1.57
CLN5-212ENST00000636602 MAGED2Q9UNF1 606 aaPredicted RBP5.23□□□□□ -1.57
CLN5-212ENST00000636602 ZMYM3Q14202 1370 aa5.23□□□□□ -1.57
CLN5-212ENST00000636602 ATRNL1Q5VV63 1379 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 ADAMTS3O15072 1205 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 KIAA0391O15091 583 aaKnown RBP5.22□□□□□ -1.57
CLN5-212ENST00000636602 TBC1D4O60343 1298 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 EIF5BO60841 1220 aaKnown RBP5.22□□□□□ -1.57
CLN5-212ENST00000636602 MATN4O95460 622 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 SBK3P0C264 359 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 FLT3LGP49771 235 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 GZMKP49863 264 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 NPEPPSP55786 919 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 NOMO3P69849 1222 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 APBA1Q02410 837 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 FSTL1Q12841 308 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 FOXL1Q12952 345 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 RALBP1Q15311 655 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 ARL13BQ3SXY8 428 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 GAGE13Q4V321 117 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 PABPC1LQ4VXU2 614 aaKnown RBP5.22□□□□□ -1.57
CLN5-212ENST00000636602 CCDC93Q567U6 631 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 FAM47AQ5JRC9 791 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 MFSD14BQ5SR56 506 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 DACT2Q5SW24 774 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 EMC10Q5UCC4 262 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 LAIR1Q6GTX8 287 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 SYTL1Q8IYJ3 562 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 CMTM4Q8IZR5 234 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 RNF152Q8N8N0 203 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 CEP95Q96GE4 821 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 ZNF764Q96H86 408 aaPredicted RBP5.22□□□□□ -1.57
CLN5-212ENST00000636602 NAP1L4Q99733 375 aaKnown RBP5.22□□□□□ -1.57
CLN5-212ENST00000636602 MYOCQ99972 504 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 MRI1Q9BV20 369 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 BRIP1Q9BX63 1249 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 PACSIN1Q9BY11 444 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 COL20A1Q9P218 1284 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 ZDHHC8Q9ULC8 765 aa5.22□□□□□ -1.57
CLN5-212ENST00000636602 TCRBV7S2A1N4TA0A589 114 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 MATN2O00339 956 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 BTN3A1O00481 513 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 ARHGAP6O43182 974 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 WDHD1O75717 1129 aaPredicted RBP5.21□□□□□ -1.58
CLN5-212ENST00000636602 ERBB2P04626 1255 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 MTHFD1P11586 935 aaKnown RBP5.21□□□□□ -1.58
CLN5-212ENST00000636602 ATP5JP18859 108 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 RPS19P39019 145 aaKnown RBP5.21□□□□□ -1.58
CLN5-212ENST00000636602 HSPA7P48741 367 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 RENBPP51606 427 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 ARFIP2P53365 341 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 RPS16P62249 146 aaKnown RBP5.21□□□□□ -1.58
CLN5-212ENST00000636602 HGFACQ04756 655 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 ICA1Q05084 483 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 POU5F1BQ06416 359 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 SLC13A2Q13183 592 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 GRM1Q13255 1194 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 BIRC3Q13489 604 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 HABP2Q14520 560 aaPredicted RBP5.21□□□□□ -1.58
CLN5-212ENST00000636602 TBR1Q16650 682 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 CCDC38Q502W7 563 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 SLC44A4Q53GD3 710 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 PGBD2Q6P3X8 592 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 GGT6Q6P531 493 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 TXLNBQ8N3L3 684 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 MYCT1Q8N699 235 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 ZNF527Q8NB42 609 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 ATP11CQ8NB49 1132 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 SPATA5Q8NB90 893 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 TRIM63Q969Q1 353 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 IQCDQ96DY2 449 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 TMEM41AQ96HV5 264 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 GPHA2Q96T91 129 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 TTLL2Q9BWV7 592 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 EPC1Q9H2F5 836 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 BRD9Q9H8M2 597 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.21□□□□□ -1.58
CLN5-212ENST00000636602 PARPBPQ9NWS1 579 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 PTGFRNQ9P2B2 879 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 CFAP97Q9P2B7 532 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 SLC23A1Q9UHI7 598 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 MED16Q9Y2X0 877 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 NR2E1Q9Y466 385 aa5.21□□□□□ -1.58
CLN5-212ENST00000636602 A0A1W2PPC4 97 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 TRIM43BA6NCK2 446 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 PEX11BO96011 259 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 GNAI2P04899 355 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 GJB1P08034 283 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 ITGB6P18564 788 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 MSX2P35548 267 aaPredicted RBP5.2□□□□□ -1.58
CLN5-212ENST00000636602 GRK6P43250 576 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 BLMHQ13867 455 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 PUM3Q15397 648 aaKnown RBP5.2□□□□□ -1.58
CLN5-212ENST00000636602 MPEG1Q2M385 716 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 SLC35G1Q2M3R5 365 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 OTUD7BQ6GQQ9 843 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 ZNF529Q6P280 563 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 TMED8Q6PL24 325 aaPredicted RBP5.2□□□□□ -1.58
CLN5-212ENST00000636602 UBE3BQ7Z3V4 1068 aa5.2□□□□□ -1.58
CLN5-212ENST00000636602 TMPRSS6Q8IU80 811 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms