RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 PPCSQ9HAB8 311 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 HPS5Q9UPZ3 1129 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 SH3BP1Q9Y3L3 701 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 PKP3Q9Y446 797 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 RBP3P10745 1247 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 NCAM1P13591 858 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 DPEP1P16444 411 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 RPS12P25398 132 aaKnown RBP13.39□□□□□ -0.27
SCN8A-209ENST00000627620 ITGA8P53708 1063 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 SHCBP1Q8NEM2 672 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 PPP1R2P1Q96PQ5 205 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 FOXP3Q9BZS1 431 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 ITGB3P05106 788 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 NLRP11P59045 1033 aaKnown RBP13.39□□□□□ -0.27
SCN8A-209ENST00000627620 GRIN1Q05586 938 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 KYNUQ16719 465 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 CALML6Q8TD86 181 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 ZNF473Q8WTR7 871 aaKnown RBP13.39□□□□□ -0.27
SCN8A-209ENST00000627620 YIPF3Q9GZM5 350 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 NSMCE4AQ9NXX6 385 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 CHORDC1Q9UHD1 332 aaPredicted RBP13.39□□□□□ -0.27
SCN8A-209ENST00000627620 SPAG6O75602 509 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 KLRC1P26715 233 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 CENPCQ03188 943 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 MTM1Q13496 603 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 MRPL1Q9BYD6 325 aaKnown RBP13.39□□□□□ -0.27
SCN8A-209ENST00000627620 CELF4Q9BZC1 486 aaKnown RBP13.39□□□□□ -0.27
SCN8A-209ENST00000627620 CD274Q9NZQ7 290 aa13.39□□□□□ -0.27
SCN8A-209ENST00000627620 PHF20L1A8MW92 1017 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SLC37A4O43826 429 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 OCM2P0CE71 109 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 OCMP0CE72 109 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 KCNJ1P48048 391 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 TAF6P49848 677 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CPT1AP50416 773 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 HDAC4P56524 1084 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 PKN3Q6P5Z2 889 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CDR2LQ86X02 465 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ANKRD13AQ8IZ07 590 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 OTULINQ96BN8 352 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CDC42BPAQ5VT25 1732 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SUPT3HB4E1H0 165 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CYP11B2P19099 503 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ETFBP38117 255 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 USP38Q8NB14 1042 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SYN2Q92777 582 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 NUDT12Q9BQG2 462 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 AGPAT3Q9NRZ7 376 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ARHGAP26Q9UNA1 814 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CD163L1Q9NR16 1453 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SPATA31A6Q5VVP1 1343 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CNTNAP4Q9C0A0 1308 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 C5orf58C9J3I9 102 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SEC24DO94855 1032 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ENO3P13929 434 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 KIRREL3Q8IZU9 778 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 FAM71DQ8N9W8 422 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CCT8L2Q96SF2 557 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 KLF6Q99612 283 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 TRAF3IP3Q9Y228 551 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 USP15Q9Y4E8 981 aaPredicted RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 SMAPO00193 183 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ICAM1P05362 532 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 FAM200BP0CF97 657 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 KLRK1P26718 216 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CHSY1Q86X52 802 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 C1orf131Q8NDD1 294 aaKnown RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 CATSPER1Q8NEC5 780 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 RUSC1Q9BVN2 902 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 GOLPH3Q9H4A6 298 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 KLC4Q9NSK0 619 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 PNPLA4P41247 253 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 HUNKP57058 714 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 PPP4CP60510 307 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 MEI1Q5TIA1 1274 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 PTRHD1Q6GMV3 140 aaKnown RBP13.38□□□□□ -0.27
SCN8A-209ENST00000627620 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 ERP44Q9BS26 406 aa13.38□□□□□ -0.27
SCN8A-209ENST00000627620 HARS2P49590 506 aaKnown RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 C10orf120Q5SQS8 335 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 AGBL2Q5U5Z8 902 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 XPO6Q96QU8 1125 aaKnown RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 CDV3Q9UKY7 258 aaKnown RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 ABCA6Q8N139 1617 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 MADDQ8WXG6 1647 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 GRIN3BO60391 1043 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 PDIA6Q15084 440 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 TTC39BQ5VTQ0 682 aaPredicted RBP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 BARGINQ6ZT62 677 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 DDX42Q86XP3 938 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCN8A-209ENST00000627620 ERGIC2Q96RQ1 377 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 IL25Q9H293 177 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 C17orf75Q9HAS0 396 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
SCN8A-209ENST00000627620 UNC13BO14795 1591 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms