RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 C5orf42Q9H799 3197 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 STX10O60499 249 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 RFPL2O75678 378 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 ZMYND10O75800 440 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 PAPLNO95428 1278 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 C8AP07357 584 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 OR4Q2P0C623 313 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 GTF2H1P32780 548 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 ZNF699Q32M78 642 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 WDR72Q3MJ13 1102 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 CCDC183Q5T5S1 534 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 FRMD5Q7Z6J6 570 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 GPR149Q86SP6 731 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 ADGRF2Q8IZF7 708 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 OR10T2Q8NGX3 314 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 MMRN2Q9H8L6 949 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 TMEM8AQ9HCN3 771 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 AFF4Q9UHB7 1163 aaKnown RBP19.62■□□□□ 0.73
LITAF-220ENST00000620789 DACH1Q9UI36 760 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 CDH22Q9UJ99 828 aa19.62■□□□□ 0.73
LITAF-220ENST00000620789 CCDC195A0A1B0GUA6 201 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 HLA-DRAP01903 254 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 PIK3CAP42336 1068 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 TNNC1P63316 161 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 GPR17Q13304 367 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 CBX2Q14781 532 aaPredicted RBP19.61■□□□□ 0.73
LITAF-220ENST00000620789 SGSM1Q2NKQ1 1148 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 UVSSAQ2YD98 709 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 CCDC40Q4G0X9 1142 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 DCAF17Q5H9S7 520 aaPredicted RBP19.61■□□□□ 0.73
LITAF-220ENST00000620789 TCERG1LQ5VWI1 586 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 KRT39Q6A163 491 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 RNF19BQ6ZMZ0 732 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 CCDC149Q6ZUS6 474 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 RTL10Q7L3V2 364 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 SLC7A14Q8TBB6 771 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 FEZF2Q8TBJ5 459 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 RIPOR3Q96MK2 946 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 MED15Q96RN5 788 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 TMEM209Q96SK2 561 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 MMS19Q96T76 1030 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 SRRTQ9BXP5 876 aaKnown RBP19.61■□□□□ 0.73
LITAF-220ENST00000620789 RHOBTB2Q9BYZ6 727 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 ZCWPW1Q9H0M4 648 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 DDX43Q9NXZ2 648 aaKnown RBP19.61■□□□□ 0.73
LITAF-220ENST00000620789 MAFFQ9ULX9 164 aa19.61■□□□□ 0.73
LITAF-220ENST00000620789 GABRDO14764 452 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 FGFR1OPO95684 399 aaKnown RBP19.6■□□□□ 0.73
LITAF-220ENST00000620789 GNA14O95837 355 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 HNRNPA1P09651 372 aaKnown RBP eCLIP19.6■□□□□ 0.73
LITAF-220ENST00000620789 WEE2P0C1S8 567 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 HOXA9P31269 272 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 ELF1P32519 619 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 MTHFRP42898 656 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 LHX1P48742 406 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 MXI1P50539 228 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 MYL7Q01449 175 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 ADCY1Q08828 1119 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 PPM1LQ5SGD2 360 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 ATAT1Q5SQI0 421 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 CYP26C1Q6V0L0 522 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 OSTM1Q86WC4 334 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 TCEAL8Q8IYN2 117 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 TAS1R2Q8TE23 839 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 KBTBD7Q8WVZ9 684 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 TAF4BQ92750 862 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 SLC35C1Q96A29 364 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 ZNF707Q96C28 371 aaPredicted RBP19.6■□□□□ 0.73
LITAF-220ENST00000620789 NECTIN4Q96NY8 510 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 PRKD2Q9BZL6 878 aa19.6■□□□□ 0.73
LITAF-220ENST00000620789 NXF1Q9UBU9 619 aaKnown RBP19.6■□□□□ 0.73
LITAF-220ENST00000620789 TCF20Q9UGU0 1960 aaKnown RBP19.59■□□□□ 0.73
LITAF-220ENST00000620789 TACC1O75410 805 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 CLSTN1O94985 981 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 SEC24AO95486 1093 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 ASS1P00966 412 aaKnown RBP19.59■□□□□ 0.73
LITAF-220ENST00000620789 FAM163BP0C2L3 166 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 WARSP23381 471 aaKnown RBP19.59■□□□□ 0.73
LITAF-220ENST00000620789 ERCC5P28715 1186 aaPredicted RBP19.59■□□□□ 0.73
LITAF-220ENST00000620789 SLC39A12Q504Y0 691 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 ZNF667Q5HYK9 610 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 ADAMTS19Q8TE59 1207 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 PGLYRP2Q96PD5 576 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 ACBD6Q9BR61 282 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 IMPG2Q9BZV3 1241 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 CYP4F11Q9HBI6 524 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 TMEM63CQ9P1W3 806 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 PRKAG3Q9UGI9 489 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 POLIQ9UNA4 740 aa19.59■□□□□ 0.73
LITAF-220ENST00000620789 C2orf16Q68DN1 1984 aa19.58■□□□□ 0.73
LITAF-220ENST00000620789 MTMR11A4FU01 709 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 PRRG1O14668 218 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 VNN2O95498 520 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 POU2F2P09086 479 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 PCSK1P29120 753 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 MARSP56192 900 aaKnown RBP19.58■□□□□ 0.72
LITAF-220ENST00000620789 TSPY1Q01534 308 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 CT47A1Q5JQC4 288 aaPredicted RBP19.58■□□□□ 0.72
LITAF-220ENST00000620789 SASS6Q6UVJ0 657 aa19.58■□□□□ 0.72
LITAF-220ENST00000620789 DCP1BQ8IZD4 617 aaKnown RBP19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms