RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 ZBTB10Q96DT7 871 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 SLKQ9H2G2 1235 aaPredicted RBP8.46□□□□□ -1.06
CBWD1-228ENST00000619157 RNPEPQ9H4A4 650 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 C6orf50Q9HD87 102 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 SH3GLB2Q9NR46 395 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 PCDHB12Q9Y5F1 795 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 PMF1-BGLAPU3KQ54 211 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 NFASCO94856 1347 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 STK36Q9NRP7 1315 aa8.46□□□□□ -1.06
CBWD1-228ENST00000619157 TET1Q8NFU7 2136 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 UNC80Q8N2C7 3258 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 NOP56O00567 594 aaKnown RBP8.45□□□□□ -1.06
CBWD1-228ENST00000619157 CPLX1O14810 134 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 MAFGO15525 162 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 NBNO60934 754 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 IQCF3P0C7M6 154 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 SUPT20HL2P0C7V6 817 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 ATF2P15336 505 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 CIITAP33076 1130 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 RBM25P49756 843 aaKnown RBP8.45□□□□□ -1.06
CBWD1-228ENST00000619157 ACTR2P61160 394 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 NR1I3Q14994 352 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 RTP2Q5QGT7 225 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 MARCH8Q5T0T0 291 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 NIPA1Q7RTP0 329 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 NLRC3Q7RTR2 1065 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 SERINC5Q86VE9 423 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 PLA2G4DQ86XP0 818 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 BLIDQ8IZY5 108 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 TMEM199Q8N511 208 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 C7orf31Q8N865 590 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 CCDC148Q8NFR7 591 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 LMBR1Q8WVP7 490 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 HERVK_113Q902F9 699 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 RNPC3Q96LT9 517 aaKnown RBP8.45□□□□□ -1.06
CBWD1-228ENST00000619157 PHF20Q9BVI0 1012 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 KATNAL1Q9BW62 490 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 GLT8D2Q9H1C3 349 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 TTYH1Q9H313 450 aaPredicted RBP8.45□□□□□ -1.06
CBWD1-228ENST00000619157 SETD4Q9NVD3 440 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 DUSP10Q9Y6W6 482 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 VCANP13611 3396 aa8.45□□□□□ -1.06
CBWD1-228ENST00000619157 PRUNE2Q8WUY3 3088 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 IGKV6D-21A0A0A0MT36 114 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 C17orf102A2RUQ5 167 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 DDX39AO00148 427 aaKnown RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 MSH4O15457 936 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 TDP2O95551 362 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 DBHP09172 617 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 GSTM1P09488 218 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 CKBP12277 381 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 MARK3P27448 753 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 GNA11P29992 359 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 MC3RP41968 323 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 NLRP5P59047 1200 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 AKAP17AQ02040 695 aaKnown RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 ANKRD1Q15327 319 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 TARBP2Q15633 366 aaKnown RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 ZNF618Q5T7W0 954 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 ABHD15Q6UXT9 468 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 RUFY4Q6ZNE9 571 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 OTOP2Q7RTS6 562 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 DEFB128Q7Z7B8 93 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 CCDC60Q8IWA6 550 aaPredicted RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 GIMAP8Q8ND71 665 aaPredicted RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 TBCKQ8TEA7 893 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 CCDC12Q8WUD4 166 aaPredicted RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 SEPT1Q8WYJ6 367 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 CDHR1Q96JP9 859 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 MBOAT7Q96N66 472 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 SLC6A18Q96N87 628 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 EHMT1Q9H9B1 1298 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 SLC9A2Q9UBY0 812 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 VTI1BQ9UEU0 232 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 EMSYQ7Z589 1322 aa8.44□□□□□ -1.06
CBWD1-228ENST00000619157 TRIP12Q14669 1992 aaPredicted RBP8.44□□□□□ -1.06
CBWD1-228ENST00000619157 CYP3A7-CYP3A51PA0A087WV96 503 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 FAM86C2PA6NEL3 165 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 IPO5O00410 1097 aaKnown RBP8.43□□□□□ -1.06
CBWD1-228ENST00000619157 SLC37A4O43826 429 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 ATE1O95260 518 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 FGBP02675 491 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 CXCL10P02778 98 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 CYP3A7P24462 503 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 TACR1P25103 407 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 CNR2P34972 360 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 SMAD3P84022 425 aaKnown RBP8.43□□□□□ -1.06
CBWD1-228ENST00000619157 PLCB4Q15147 1175 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 PRR16Q569H4 304 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 BICRALQ6AI39 1079 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 PSRC1Q6PGN9 363 aaPredicted RBP8.43□□□□□ -1.06
CBWD1-228ENST00000619157 B3GNT9Q6UX72 402 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 LRRC8DQ7L1W4 858 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 JAMLQ86YT9 394 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 DEFB123Q8N688 67 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 CAGE1Q8TC20 777 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 AFAP1L1Q8TED9 768 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 TRAPPC12Q8WVT3 735 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 GUCD1Q96NT3 240 aa8.43□□□□□ -1.06
CBWD1-228ENST00000619157 LRRC3Q9BY71 257 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms