RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CPA5Q8WXQ8 436 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 SNTNA6NMZ2 147 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 SMAPO00193 183 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 STAG3L1P0CL83 205 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 POU4F1Q01851 419 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 GUCY1A3Q02108 690 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 TOB2Q14106 344 aaPredicted RBP11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 GPRC5AQ8NFJ5 357 aa11.66□□□□□ -0.54
CCDC144B-208ENST00000618081 MUTP22033 750 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 PREPLQ4J6C6 727 aaPredicted RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 BTNL9Q6UXG8 535 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 TMEM143Q96AN5 459 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 APOL5Q9BWW9 433 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 RSAD1Q9HA92 442 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 RPRD1BQ9NQG5 326 aaKnown RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 GRK3P35626 688 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 IYDQ6PHW0 289 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 SETD3Q86TU7 594 aaPredicted RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 NLRP14Q86W24 1093 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 MICALL2Q8IY33 904 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 RBBP8Q99708 897 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 PRMT7Q9NVM4 692 aaPredicted RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 SEPT3Q9UH03 358 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 ZC3H13Q5T200 1668 aaKnown RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 TFRCP02786 760 aaKnown RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 STX3Q13277 289 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 FAM83EQ2M2I3 478 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 FGD2Q7Z6J4 655 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 TFB1MQ8WVM0 346 aaKnown RBP11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 SPATA31A3Q5VYP0 1347 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 PITPNM2Q9BZ72 1349 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC11A2P49281 568 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 FMO5P49326 533 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 STAG2Q8N3U4 1231 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 CPVLQ9H3G5 476 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 IMPAD1Q9NX62 359 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 SLC39A10Q9ULF5 831 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 CDH16O75309 829 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 ERAP2Q6P179 960 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 RAD18Q9NS91 495 aa11.65□□□□□ -0.54
CCDC144B-208ENST00000618081 MAP3K13O43283 966 aa11.65□□□□□ -0.55
CCDC144B-208ENST00000618081 KCNK10P57789 538 aa11.65□□□□□ -0.55
CCDC144B-208ENST00000618081 LAMC2Q13753 1193 aa11.65□□□□□ -0.55
CCDC144B-208ENST00000618081 ZNF677Q86XU0 584 aa11.65□□□□□ -0.55
CCDC144B-208ENST00000618081 UTP6Q9NYH9 597 aaKnown RBP11.65□□□□□ -0.55
CCDC144B-208ENST00000618081 CITO14578 2027 aa11.65□□□□□ -0.55
CCDC144B-208ENST00000618081 TDP2O95551 362 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 EIF2S1P05198 315 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 RPLP2P05387 115 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ENO3P13929 434 aaPredicted RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 SLC16A1P53985 500 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 TMEM62Q0P6H9 643 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 EMC2Q15006 297 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 C16orf62Q7Z3J2 963 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 PARP9Q8IXQ6 854 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 C10orf53Q8N6V4 93 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ZNF513Q8N8E2 541 aaPredicted RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ATP6V0D2Q8N8Y2 350 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 SLC30A5Q8TAD4 765 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 KCNK16Q96T55 309 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 NUDT12Q9BQG2 462 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CRLS1Q9UJA2 301 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 RASSF9O75901 435 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 RGS7P49802 495 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CLEC16AQ2KHT3 1053 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 HPDLQ96IR7 371 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 NEU2Q9Y3R4 380 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ALOX15P16050 662 aaPredicted RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 EFCAB12Q6NXP0 572 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 LVRNQ6Q4G3 990 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 RIBC1Q8N443 379 aaPredicted RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ADAM21Q9UKJ8 722 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ABCC3O15438 1527 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 EXTL3O43909 919 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 EPB42P16452 691 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 EMILIN2Q9BXX0 1053 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 NAGPAQ9UK23 515 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ARL2BPQ9Y2Y0 163 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 POLRMTO00411 1230 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ITIH2P19823 946 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 FCGRTP55899 365 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 SLFNL1Q499Z3 407 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CYP4A22Q5TCH4 519 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 TMEM169Q96HH4 297 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 VPS33BQ9H267 617 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ANXA9O76027 345 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 SRP72O76094 671 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 ERVK-10P10266 1014 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CASP1P29466 404 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CHI3L1P36222 383 aaPredicted RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CYTH1Q15438 398 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 TRIM71Q2Q1W2 868 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CEP78Q5JTW2 689 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 RFX8Q6ZV50 586 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 IPMKQ8NFU5 416 aa11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 CDK5RAP1Q96SZ6 601 aaKnown RBP11.64□□□□□ -0.55
CCDC144B-208ENST00000618081 RBM15Q96T37 977 aaKnown RBP eCLIP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms