RNA–Protein interactions for RNA: ENST00000617958.4

CPEB1-215, Transcript of cytoplasmic polyadenylation element binding protein 1, human

TSL 1 (best) BASIC

Gene CPEB1, Length 2,776 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPEB1-215	ENST00000617958	PTGER2	P43116	358 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	CDK18	Q07002	472 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	KIF22	Q14807	665 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	SLC1A5	Q15758	541 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	CLPP	Q16740	277 aa	Predicted RBP	11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	CLEC16A	Q2KHT3	1053 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	EAPP	Q56P03	285 aa	Predicted RBP	11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	HEATR3	Q7Z4Q2	680 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	PATL1	Q86TB9	770 aa	Known RBP	11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZNF276	Q8N554	614 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	ATP11C	Q8NB49	1132 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	JADE3	Q92613	823 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	BIRC8	Q96P09	236 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	KANSL2	Q9H9L4	492 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	S100A14	Q9HCY8	104 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	CD209	Q9NNX6	404 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	MAD2L2	Q9UI95	211 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	FADS3	Q9Y5Q0	445 aa		11.3	□□□□□ -0.6
CPEB1-215	ENST00000617958	EXOC1L	A0A1B0GW35	172 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	PDE5A	O76074	875 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	TNFAIP3	P21580	790 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	MSLN	Q13421	630 aa	Predicted RBP	11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	SBK1	Q52WX2	424 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	TCERG1L	Q5VWI1	586 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	PCNX4	Q63HM2	1172 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	TRIM67	Q6ZTA4	783 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	CENPU	Q71F23	418 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	SLC35C1	Q96A29	364 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	ALKBH8	Q96BT7	664 aa	Known RBP	11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	DNAJC1	Q96KC8	554 aa	Known RBP	11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZNF696	Q9H7X3	374 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	ARHGEF38	Q9NXL2	777 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	BIN2	Q9UBW5	565 aa	Predicted RBP	11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	EFR3B	Q9Y2G0	817 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	SERPINB7	O75635	380 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	MARCKSL1	P49006	195 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	LPIN1	Q14693	890 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	RAPH1	Q70E73	1250 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	KCNK18	Q7Z418	384 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	CHSY1	Q86X52	802 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	ULK2	Q8IYT8	1036 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	AHI1	Q8N157	1196 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	RFWD2	Q8NHY2	731 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	PPM1H	Q9ULR3	514 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	NRXN2	Q9P2S2	1712 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	RGPD4	Q7Z3J3	1758 aa		11.29	□□□□□ -0.6
CPEB1-215	ENST00000617958	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	CAPN14	A8MX76	684 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	hCG_1984214	I3L0E3	225 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	TRMU	O75648	421 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	FGFR1	P11362	822 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	COMT	P21964	271 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	KCNJ1	P48048	391 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	SCNN1D	P51172	638 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	GPC5	P78333	572 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	MECOM	Q03112	1051 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZBTB16	Q05516	673 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	BMT2	Q1RMZ1	405 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	MMEL1	Q495T6	779 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	SGO2	Q562F6	1265 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	LVRN	Q6Q4G3	990 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	PACS1	Q6VY07	963 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ARMCX6	Q7L4S7	300 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ARPIN	Q7Z6K5	226 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ERI1	Q8IV48	349 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZCCHC9	Q8N567	271 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZNF713	Q8N859	430 aa	Predicted RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	PNMA1	Q8ND90	353 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	TBCK	Q8TEA7	893 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	EIF2A	Q9BY44	585 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958		Q9H521	79 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	KCNK13	Q9HB14	408 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	PFDN4	Q9NQP4	134 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	NEU2	Q9Y3R4	380 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	KIAA1551	Q9HCM1	1747 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	TCRBV7S2A1N4T	A0A589	114 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	ZBED1	O96006	694 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	DLD	P09622	509 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	CENPC	Q03188	943 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	NFIL3	Q16649	462 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	MAPK6	Q16659	721 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	CCDC142	Q17RM4	750 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	KNOP1	Q1ED39	458 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	TMEM53	Q6P2H8	277 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	LRRC8B	Q6P9F7	803 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	SP8	Q8IXZ3	490 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	CERS5	Q8N5B7	392 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	CCDC89	Q8N998	374 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	MTBP	Q96DY7	904 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	NAP1L4	Q99733	375 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	PLGRKT	Q9HBL7	147 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	SLC7A8	Q9UHI5	535 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	HBS1L	Q9Y450	684 aa	Known RBP	11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	NFASC	O94856	1347 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958	NPHP3-ACAD11	A0A0J9YXS1	232 aa		11.28	□□□□□ -0.6
CPEB1-215	ENST00000617958		B2RBV5	119 aa		11.28	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms