RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 MEIS3P2A8K0S8 358 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 F8VZ95 297 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 TULP1O00294 542 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 LRRN2O75325 713 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 ITGB3P05106 788 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 TBXAS1P24557 533 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 LRPAP1P30533 357 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 BMPR1AP36894 532 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 MLH1P40692 756 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 MFAP3P55082 362 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 MYL6P60660 151 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 RBP5P82980 135 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 ZXDAP98168 799 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 LRMPQ12912 555 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 ADAM15Q13444 863 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 ZNF699Q32M78 642 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 GLRA4Q5JXX5 417 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 GJB7Q6PEY0 223 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 BMP8AQ7Z5Y6 402 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 FIBCD1Q8N539 461 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 GSTCDQ8NEC7 633 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 SHC3Q92529 594 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 BAG1Q99933 345 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 PI4K2AQ9BTU6 479 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 GPR88Q9GZN0 384 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 NIF3L1Q9GZT8 377 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 CXCL16Q9H2A7 254 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 FAM124BQ9H5Z6 455 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 APOBEC3GQ9HC16 384 aaKnown RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 ZNHIT6Q9NWK9 470 aaKnown RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 TMEM161AQ9NX61 479 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 AIPL1Q9NZN9 384 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 KLK14Q9P0G3 267 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 TUBGCP4Q9UGJ1 667 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 BARX2Q9UMQ3 279 aaPredicted RBP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.26□□□□□ -0.45
SLIRP-212ENST00000613856 CACNA1HO95180 2353 aa12.26□□□□□ -0.45
SLIRP-212ENST00000613856 ZFHX2Q9C0A1 2572 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 ANO9A1A5B4 782 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 LOC730098B7Z3J9 87 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 ENPP3O14638 875 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 CST3P01034 146 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 POLR2BP30876 1174 aaKnown RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 PRKCIP41743 596 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 STAT1P42224 750 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 NDUFV1P49821 464 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 GRIK3Q13003 919 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 CUL2Q13617 745 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 RAPGEF1Q13905 1077 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 DRAP1Q14919 205 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 NAB2Q15742 525 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 SFMBT2Q5VUG0 894 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 E4F1Q66K89 784 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 WDR59Q6PJI9 974 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 CYP26C1Q6V0L0 522 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 TMTC1Q8IUR5 882 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 PPM1KQ8N3J5 372 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 FBXL6Q8N531 539 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 LPPQ93052 612 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 C18orf25Q96B23 403 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 ASIC4Q96FT7 647 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 ZFP42Q96MM3 310 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 ZNF560Q96MR9 790 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 KREMEN1Q96MU8 473 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 GAD1Q99259 594 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 UBE2TQ9NPD8 197 aaPredicted RBP12.25□□□□□ -0.45
SLIRP-212ENST00000613856 NUB1Q9Y5A7 615 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 SPTBN4Q9H254 2564 aa12.25□□□□□ -0.45
SLIRP-212ENST00000613856 H0Y858 1186 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 PIRO00625 290 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 ARHGAP6O43182 974 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 HOXA2O43364 376 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 OFD1O75665 1012 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 THP07101 528 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 KRT19P08727 400 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 SKILP12757 684 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 FERP16591 822 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 ANXA13P27216 316 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 SOX5P35711 763 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 PNPLA4P41247 253 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 TSC2P49815 1807 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 GATMP50440 423 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 SCNN1GP51170 649 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 GUCY2FP51841 1108 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 ASIC2Q16515 512 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 C9orf57Q5W0N0 161 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 SPOPLQ6IQ16 392 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 GLB1LQ6UWU2 654 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 ASCL5Q7RTU5 278 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 RBM23Q86U06 439 aaKnown RBP12.24□□□□□ -0.45
SLIRP-212ENST00000613856 CRIPAKQ8N1N5 446 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 UBR7Q8N806 425 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 SMRP1Q8NCR6 262 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 VN1R2Q8NFZ6 395 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 KAT5Q92993 513 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 TATDN2Q93075 761 aa12.24□□□□□ -0.45
SLIRP-212ENST00000613856 C11orf84Q9BUA3 381 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms