RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 CTIFO43310 598 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MED7O43513 233 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MYBL1P10243 752 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 PRLRP16471 622 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 IBSPP21815 317 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MNX1P50219 401 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 SCNN1GP51170 649 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 LILRA4P59901 499 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 SV2CQ496J9 727 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MON1BQ7L1V2 547 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 ZNF598Q86UK7 904 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 RTN4RL1Q86UN2 441 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 PHF13Q86YI8 300 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 SYCE1Q8N0S2 351 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 TRIM11Q96F44 468 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 ZNF333Q96JL9 665 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 CALR3Q96L12 384 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MRPL45Q9BRJ2 306 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 NT5C1AQ9BXI3 368 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 TSPYL2Q9H2G4 693 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 GOLPH3Q9H4A6 298 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 UBN1Q9NPG3 1134 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 GDAP2Q9NXN4 497 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 CNOT8Q9UFF9 292 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 CHORDC1Q9UHD1 332 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 BUB1BO60566 1050 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 SRGAP2O75044 1071 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MTA2O94776 668 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 TFRCP02786 760 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 ATN1P54259 1190 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 WHAMMP3Q1A5X7 153 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 SOWAHAQ2M3V2 549 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 DAAM2Q86T65 1068 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 ECHDC2Q86YB7 292 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 LRRN4CLQ8ND94 238 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 VCPIP1Q96JH7 1222 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 HEXIM2Q96MH2 286 aaKnown RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 NUP85Q9BW27 656 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 ZNF518BQ9C0D4 1074 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 AVENQ9NQS1 362 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 ADAM22Q9P0K1 906 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 UVRAGQ9P2Y5 699 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 HYOU1Q9Y4L1 999 aa13.09□□□□□ -0.31
CBWD1-220ENST00000612045 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.09□□□□□ -0.31
CBWD1-220ENST00000612045 MKI67P46013 3256 aaKnown RBP13.08□□□□□ -0.32
CBWD1-220ENST00000612045 HSPA8P11142 646 aaKnown RBP13.08□□□□□ -0.32
CBWD1-220ENST00000612045 VDRP11473 427 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 RRM1P23921 792 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 CDH5P33151 784 aaPredicted RBP13.08□□□□□ -0.32
CBWD1-220ENST00000612045 GPNMBQ14956 572 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 SLC39A5Q6ZMH5 540 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 SLC24A5Q71RS6 500 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 ANKRD33Q7Z3H0 272 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 LIMS2Q7Z4I7 341 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 WDTC1Q8N5D0 677 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 TMEM35BQ8NCS4 154 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 C1orf131Q8NDD1 294 aaKnown RBP13.08□□□□□ -0.32
CBWD1-220ENST00000612045 MNS1Q8NEH6 495 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 ZNF564Q8TBZ8 553 aaPredicted RBP13.08□□□□□ -0.32
CBWD1-220ENST00000612045 LINC01599Q8WXQ3 324 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 OSBPL9Q96SU4 736 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 C11orf70Q9BRQ4 267 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 FTHL17Q9BXU8 183 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 LHX5Q9H2C1 402 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 ABCB6Q9NP58 842 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 KIAA1257Q9ULG3 409 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
CBWD1-220ENST00000612045 CEP83Q9Y592 693 aa13.08□□□□□ -0.32
CBWD1-220ENST00000612045 C9IYK1 514 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 NBNO60934 754 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 TCP1P17987 556 aaKnown RBP13.07□□□□□ -0.32
CBWD1-220ENST00000612045 MMP8P22894 467 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 RPL9P32969 192 aaKnown RBP13.07□□□□□ -0.32
CBWD1-220ENST00000612045 CLCNKBP51801 687 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 FAM189BP81408 668 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 PTP4A2Q12974 167 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 CNGA2Q16280 664 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 C2CD6Q53TS8 623 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 SGO2Q562F6 1265 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 DENND1BQ6P3S1 775 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 MMS22LQ6ZRQ5 1243 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 PEX26Q7Z412 305 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 UNC93AQ86WB7 457 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 CEP112Q8N8E3 955 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 APPL2Q8NEU8 664 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 KBTBD7Q8WVZ9 684 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 CACNG4Q9UBN1 327 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 L1RE1Q9UN81 338 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 STXBP5LQ9Y2K9 1186 aa13.07□□□□□ -0.32
CBWD1-220ENST00000612045 O00370 1275 aa13.06□□□□□ -0.32
CBWD1-220ENST00000612045 PODXLO00592 558 aa13.06□□□□□ -0.32
CBWD1-220ENST00000612045 ZNF185O15231 689 aa13.06□□□□□ -0.32
CBWD1-220ENST00000612045 HUS1O60921 280 aa13.06□□□□□ -0.32
CBWD1-220ENST00000612045 EOMESO95936 686 aa13.06□□□□□ -0.32
CBWD1-220ENST00000612045 POMCP01189 267 aa13.06□□□□□ -0.32
CBWD1-220ENST00000612045 IGFBP6P24592 240 aaPredicted RBP13.06□□□□□ -0.32
CBWD1-220ENST00000612045 CXCR5P32302 372 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms