RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 GNL2Q13823 731 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 NFE2Q16621 373 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 PKDCCQ504Y2 493 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 INTS6LQ5JSJ4 861 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 RTP2Q5QGT7 225 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 DDX42Q86XP3 938 aaKnown RBP eCLIP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 DCP1BQ8IZD4 617 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 PDZD8Q8NEN9 1154 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 STK32AQ8WU08 396 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 NELL2Q99435 816 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 C8orf33Q9H7E9 229 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 PAXBP1Q9Y5B6 917 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 INO80B-WBP1J3KQ70 363 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 K7ENM7 598 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 TRIM66O15016 1216 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 SLC16A4O15374 487 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 GALR2O43603 387 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 FOXD2O60548 495 aaPredicted RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 TUFMP49411 452 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 VARS2Q5ST30 1063 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 TDRD5Q8NAT2 981 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 IRGQQ8WZA9 623 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 CDK5RAP1Q96SZ6 601 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 TARS2Q9BW92 718 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 METTL14Q9HCE5 456 aaKnown RBP7.72□□□□□ -1.17
CBWD1-219ENST00000611457 INSL5Q9Y5Q6 135 aa7.72□□□□□ -1.17
CBWD1-219ENST00000611457 MYH10P35580 1976 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 WDR27A2RRH5 827 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 MEIS3P2A8K0S8 358 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 SMTNL1A8MU46 457 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 NPC1O15118 1278 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 ASS1P00966 412 aaKnown RBP7.71□□□□□ -1.17
CBWD1-219ENST00000611457 SRGAP2CP0DJJ0 459 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 NPR3P17342 541 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 CDC25BP30305 580 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 CUL4BQ13620 913 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 ENPP2Q13822 863 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 STILQ15468 1287 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 C5orf22Q49AR2 442 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 ENOSF1Q7L5Y1 443 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 C1orf127Q8N9H9 656 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 XXYLT1Q8NBI6 393 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 PARD3BQ8TEW8 1205 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 DNAI2Q9GZS0 605 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 TFIP11Q9UBB9 837 aaKnown RBP7.71□□□□□ -1.17
CBWD1-219ENST00000611457 USP3Q9Y6I4 520 aa7.71□□□□□ -1.17
CBWD1-219ENST00000611457 TNFRSF10BO14763 440 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 MARCH6O60337 910 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 F11P03951 625 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 ERBB2P04626 1255 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 CDC25CP30307 473 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 CDH5P33151 784 aaPredicted RBP7.71□□□□□ -1.18
CBWD1-219ENST00000611457 PLA2G5P39877 138 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 LIG4P49917 911 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 PFKPQ01813 784 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 STK38Q15208 465 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 SPRED2Q7Z698 418 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.71□□□□□ -1.18
CBWD1-219ENST00000611457 C17orf53Q8N3J3 647 aaPredicted RBP7.71□□□□□ -1.18
CBWD1-219ENST00000611457 KDM1BQ8NB78 822 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 FAM193BQ96PV7 902 aaPredicted RBP7.71□□□□□ -1.18
CBWD1-219ENST00000611457 TMEM8AQ9HCN3 771 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 HSPBP1Q9NZL4 362 aa7.71□□□□□ -1.18
CBWD1-219ENST00000611457 DOCK4Q8N1I0 1966 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 MTMR11A4FU01 709 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 ZNF233A6NK53 670 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 CHADO15335 359 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 PAEPP09466 180 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 PTPN2P17706 415 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 ERCC5P28715 1186 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 NRIP1P48552 1158 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 CWF19L1Q69YN2 538 aaKnown RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 JADE1Q6IE81 842 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 MSANTD2Q6P1R3 559 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 GJD3Q8N144 294 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 CCDC112Q8NEF3 446 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 MSTO1Q9BUK6 570 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 DNAJC25Q9H1X3 360 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 MAN1C1Q9NR34 630 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 DPP3Q9NY33 737 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 HOOK1Q9UJC3 728 aaKnown RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 FBXO10Q9UK96 956 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 MYO6Q9UM54 1294 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 LINC01565O15544 149 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 HMGA1P17096 107 aaKnown RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 HOXD11P31277 338 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 CLCNKBP51801 687 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 ROR1Q01973 937 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 FZD5Q13467 585 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 LONRF3Q496Y0 759 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 FOXD4L5Q5VV16 416 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 USP49Q70CQ1 688 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 RNF135Q8IUD6 432 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 LMO3Q8TAP4 145 aa7.7□□□□□ -1.18
CBWD1-219ENST00000611457 FOXD4L4Q8WXT5 416 aaPredicted RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 CCDC43Q96MW1 224 aaKnown RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 LARP6Q9BRS8 491 aaKnown RBP7.7□□□□□ -1.18
CBWD1-219ENST00000611457 UPK3BL1B0FP48 263 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms