RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 BAATQ14032 418 aaPredicted RBP21.52■■□□□ 1.04
SSBP3-216ENST00000610401 RCN2Q14257 317 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 FNBP1LQ5T0N5 605 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 FAXCQ5TGI0 409 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 ZC3H18Q86VM9 953 aaKnown RBP21.52■■□□□ 1.04
SSBP3-216ENST00000610401 TEX2Q8IWB9 1127 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 OGFOD1Q8N543 542 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 ZNF395Q9H8N7 513 aaPredicted RBP21.52■■□□□ 1.04
SSBP3-216ENST00000610401 HEY2Q9UBP5 337 aa21.52■■□□□ 1.04
SSBP3-216ENST00000610401 LIASO43766 372 aa21.52■■□□□ 1.03
SSBP3-216ENST00000610401 FAM155BO75949 473 aa21.52■■□□□ 1.03
SSBP3-216ENST00000610401 CD48P09326 243 aa21.52■■□□□ 1.03
SSBP3-216ENST00000610401 OGDHQ02218 1023 aa21.52■■□□□ 1.03
SSBP3-216ENST00000610401 MAP4K3Q8IVH8 894 aa21.52■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF70Q9UC06 446 aaPredicted RBP21.52■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF536O15090 1300 aa21.52■■□□□ 1.03
SSBP3-216ENST00000610401 NRAPQ86VF7 1730 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 DPPA5A6NC42 116 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 MON1BQ7L1V2 547 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 CTAGE3PQ8IX95 158 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 PALM2Q8IXS6 379 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 UCMAQ8WVF2 138 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 SLC7A6OSQ96CW6 309 aaPredicted RBP21.51■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF277Q9NRM2 450 aaPredicted RBP21.51■■□□□ 1.03
SSBP3-216ENST00000610401 ZNF541Q9H0D2 1346 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 COL24A1Q17RW2 1714 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 WDR64B1ANS9 1081 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 CST3P01034 146 aaPredicted RBP21.51■■□□□ 1.03
SSBP3-216ENST00000610401 KLRC2P26717 231 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 RNF43Q68DV7 783 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 CLEC4DQ8WXI8 215 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 ZCWPW1Q9H0M4 648 aa21.51■■□□□ 1.03
SSBP3-216ENST00000610401 RBAKQ9NYW8 714 aaPredicted RBP21.51■■□□□ 1.03
SSBP3-216ENST00000610401 NXF1Q9UBU9 619 aaKnown RBP21.51■■□□□ 1.03
SSBP3-216ENST00000610401 TTLL13PA6NNM8 815 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 H0YIN7 160 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 CTCFP49711 727 aaPredicted RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 NCKAP1LP55160 1127 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 PGM5Q15124 567 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 TAF5Q15542 800 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 WDR72Q3MJ13 1102 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 ZCCHC9Q8N567 271 aaKnown RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 HSPH1Q92598 858 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 RNPEPL1Q9HAU8 725 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 CCDC189A1A4V9 331 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 KRT36O76013 467 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 SERPINB3P29508 390 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 CETN2P41208 172 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 FAM111AQ96PZ2 611 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 TRIM56Q9BRZ2 755 aaKnown RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 MECRQ9BV79 373 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 ARL8BQ9NVJ2 186 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 FBXO40Q9UH90 709 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 AGO2Q9UKV8 859 aaKnown RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 DNALI1O14645 258 aaPredicted RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 EDF1O60869 148 aaKnown RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 ALADP13716 330 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 NOMO3P69849 1222 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 HIF1AQ16665 826 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 ISLR2Q6UXK2 745 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 FAM71DQ8N9W8 422 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 FEZF2Q8TBJ5 459 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 MAIP1Q8WWC4 291 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 DDX50Q9BQ39 737 aaKnown RBP21.5■■□□□ 1.03
SSBP3-216ENST00000610401 CALN1Q9BXU9 219 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 PIDD1Q9HB75 910 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 TAF1LQ8IZX4 1826 aa21.5■■□□□ 1.03
SSBP3-216ENST00000610401 VNN1O95497 513 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 POTEJP0CG39 1038 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 RCN1Q15293 331 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 DNAJC24Q6P3W2 148 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 TAS1R3Q7RTX0 852 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 VPS52Q8N1B4 723 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 FBXO36Q8NEA4 188 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 SPDYE1Q8NFV5 336 aaPredicted RBP21.49■■□□□ 1.03
SSBP3-216ENST00000610401 CYTH2Q99418 400 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 SLC13A1Q9BZW2 595 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 TPBGLP0DKB5 382 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 CALB2P22676 271 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 GLRA2P23416 452 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 TNFSF9P41273 254 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 GPX6P59796 221 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 CUL2Q13617 745 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 KPNB1Q14974 876 aaKnown RBP21.49■■□□□ 1.03
SSBP3-216ENST00000610401 EEPD1Q7L9B9 569 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 CCDC60Q8IWA6 550 aaPredicted RBP21.49■■□□□ 1.03
SSBP3-216ENST00000610401 MCUR1Q96AQ8 359 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 SLITRK1Q96PX8 696 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 IWS1Q96ST2 819 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 PPP1R16BQ96T49 567 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 MIPEPQ99797 713 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 DLGAP2Q9P1A6 1054 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 WNK3Q9BYP7 1800 aa21.49■■□□□ 1.03
SSBP3-216ENST00000610401 CST8O60676 142 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 ICAM1P05362 532 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 MAPTP10636 758 aaKnown RBP21.48■■□□□ 1.03
SSBP3-216ENST00000610401 MAN1A1P33908 653 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 MXRA7P84157 204 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 CENPUQ71F23 418 aa21.48■■□□□ 1.03
SSBP3-216ENST00000610401 SLC25A41Q8N5S1 370 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms