RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 BECN1Q14457 450 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 CSRP2Q16527 193 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 JADE1Q6IE81 842 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 CRELD2Q6UXH1 353 aaPredicted RBP14.76□□□□□ -0.05
CTSA-218ENST00000607814 SYCP3Q8IZU3 236 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 KCNN1Q92952 543 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 IRF7Q92985 503 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 ACCSQ96QU6 501 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 FAM213AQ9BRX8 229 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 SEMA4GQ9NTN9 838 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 HCFC1R1Q9NWW0 138 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 MTRRQ9UBK8 725 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 SEL1LQ9UBV2 794 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 NUB1Q9Y5A7 615 aa14.76□□□□□ -0.05
CTSA-218ENST00000607814 TIMM13Q9Y5L4 95 aaPredicted RBP14.76□□□□□ -0.05
CTSA-218ENST00000607814 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.76□□□□□ -0.05
CTSA-218ENST00000607814 FRYQ5TBA9 3013 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.75□□□□□ -0.05
CTSA-218ENST00000607814 TMEM189-UBE2V1I3L0A0 370 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 RHOP08100 348 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 PFKFB1P16118 471 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 FGFR3P22607 806 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 MCM4P33991 863 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 HOXD13P35453 343 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 ZBTB6Q15916 424 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 PRR23CQ6ZRP0 262 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 DDX27Q96GQ7 796 aaKnown RBP14.75□□□□□ -0.05
CTSA-218ENST00000607814 UROC1Q96N76 676 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 C7orf25Q9BPX7 421 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 CBWD1Q9BRT8 395 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 PLEKHA5Q9HAU0 1116 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 PCDHB13Q9Y5F0 798 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 BACE2Q9Y5Z0 518 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 CDY1Q9Y6F8 540 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 STYXL1Q9Y6J8 313 aa14.75□□□□□ -0.05
CTSA-218ENST00000607814 ZZEF1O43149 2961 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 ARHGEF37A1IGU5 675 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 PTPN2P17706 415 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 MLLT6P55198 1093 aaPredicted RBP14.74□□□□□ -0.05
CTSA-218ENST00000607814 SLC5A9Q2M3M2 681 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 TANGO2Q6ICL3 276 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 SLFN12LQ6IEE8 588 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 C1orf228Q6PIY5 440 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 NELFCDQ8IXH7 590 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 ING5Q8WYH8 240 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 MCRS1Q96EZ8 462 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 PAGE5Q96GU1 130 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 TRMT61BQ9BVS5 477 aaKnown RBP14.74□□□□□ -0.05
CTSA-218ENST00000607814 PLA2G2FQ9BZM2 168 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 CUEDC2Q9H467 287 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 BRD9Q9H8M2 597 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 ZFP14Q9HCL3 533 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 SLC39A2Q9NP94 309 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 OLFML3Q9NRN5 406 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 ANGPTL2Q9UKU9 493 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 EXOC7Q9UPT5 735 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 TCHHQ07283 1943 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 ASPMQ8IZT6 3477 aa14.74□□□□□ -0.05
CTSA-218ENST00000607814 ZNF197O14709 1029 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 TRAPPC3O43617 180 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 ACTN4O43707 911 aaKnown RBP14.73□□□□□ -0.05
CTSA-218ENST00000607814 PAPSS2O95340 614 aaPredicted RBP14.73□□□□□ -0.05
CTSA-218ENST00000607814 CMA1P23946 247 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 FCARP24071 287 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 RPL9P32969 192 aaKnown RBP14.73□□□□□ -0.05
CTSA-218ENST00000607814 CXCL12P48061 93 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 NDUFA8P51970 172 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 SHC2P98077 582 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 AMPD3Q01432 767 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 DMWDQ09019 674 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 SIM2Q14190 667 aaPredicted RBP14.73□□□□□ -0.05
CTSA-218ENST00000607814 LPAL2Q16609 132 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 PRR23BQ6ZRT6 265 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 ANKS3Q6ZW76 656 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 EFCAB13Q8IY85 973 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 CEP57L1Q8IYX8 460 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 ZNF461Q8TAF7 563 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 FAM3CQ92520 227 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 HVCN1Q96D96 273 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 MSANTD3Q96H12 275 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 LRRC27Q9C0I9 530 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 GOLPH3LQ9H4A5 285 aa14.73□□□□□ -0.05
CTSA-218ENST00000607814 UBQLN1Q9UMX0 589 aaKnown RBP14.73□□□□□ -0.05
CTSA-218ENST00000607814 NDRG2Q9UN36 371 aaKnown RBP14.73□□□□□ -0.05
CTSA-218ENST00000607814 RALGAPA1Q6GYQ0 2036 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 CLIC2O15247 247 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 ADRB2P07550 413 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 PRR29P0C7W0 189 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 PSMC3P17980 439 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 SCP2P22307 547 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 LIMK1P53667 647 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 TMEM132DQ14C87 1099 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 FAM26FQ5R3K3 315 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 SPATA1Q5VX52 437 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 LMBRD2Q68DH5 695 aaPredicted RBP14.72□□□□□ -0.05
CTSA-218ENST00000607814 UNC13DQ70J99 1090 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 SPEM1Q8N4L4 309 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 RDH13Q8NBN7 331 aa14.72□□□□□ -0.05
CTSA-218ENST00000607814 DEPDC1BQ8WUY9 529 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms