RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 PNKPQ96T60 521 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 VKORC1Q9BQB6 163 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 B3GNT5Q9BYG0 378 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 ATP6V0A4Q9HBG4 840 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 DDX21Q9NR30 783 aaKnown RBP eCLIP3.59□□□□□ -1.83
SGMS1-207ENST00000602619 VSX1Q9NZR4 365 aaPredicted RBP3.59□□□□□ -1.83
SGMS1-207ENST00000602619 CTTNBP2NLQ9P2B4 639 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 HSFX1Q9UBD0 423 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 SLC45A2Q9UMX9 530 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 L1RE1Q9UN81 338 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 NEU2Q9Y3R4 380 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 USP15Q9Y4E8 981 aaPredicted RBP3.59□□□□□ -1.83
SGMS1-207ENST00000602619 SPATA31A6Q5VVP1 1343 aa3.59□□□□□ -1.83
SGMS1-207ENST00000602619 POLR2AP24928 1970 aaKnown RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 VSTM5A8MXK1 200 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 E7ENX8 843 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 CTNND1O60716 968 aaKnown RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 AGFG2O95081 481 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 GJB1P08034 283 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 SMARCA1P28370 1054 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 CTGFP29279 349 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 PTH2RP49190 550 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 TAP1Q03518 808 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 TAP2Q03519 686 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 FGL2Q14314 439 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 UTP14CQ5TAP6 766 aaKnown RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 NPNTQ6UXI9 565 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 MAEAQ7L5Y9 396 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 CAMKK1Q8N5S9 505 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 TBC1D15Q8TC07 691 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 KBTBD7Q8WVZ9 684 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 ANKS1AQ92625 1134 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 DDX17Q92841 729 aaKnown RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 CCDC136Q96JN2 1154 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 LRGUKQ96M69 825 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 C1orf43Q9BWL3 253 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 TLR10Q9BXR5 811 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 PCGF6Q9BYE7 350 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 KRTAP1-5Q9BYS1 174 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 CYP4F11Q9HBI6 524 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 GEMIN8Q9NWZ8 242 aaKnown RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 ETAA1Q9NY74 926 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 TESQ9UGI8 421 aaKnown RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 RIPOR2Q9Y4F9 1068 aa3.58□□□□□ -1.84
SGMS1-207ENST00000602619 COL3A1P02461 1466 aaPredicted RBP3.58□□□□□ -1.84
SGMS1-207ENST00000602619 LOC102724159A0A0B4J2E5 919 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 CENPVL1A0A0U1RR11 272 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 MYO1FO00160 1098 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 TPP1O14773 563 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 KIF3BO15066 747 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 PHGDHO43175 533 aaKnown RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 ERN1O75460 977 aaKnown RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 DNAJB5O75953 348 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 ZFPL1O95159 310 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 HLA-DOAP06340 250 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 GNAI3P08754 354 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 NPR1P16066 1061 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 RHCEP18577 417 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 LAG3P18627 525 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 ATF3P18847 181 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 FDXRP22570 491 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 DDX6P26196 483 aaKnown RBP eCLIP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 GNAI1P63096 354 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 CXADRP78310 365 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 RHDQ02161 417 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 PIGFQ07326 219 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 HABP2Q14520 560 aaPredicted RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 GRM3Q14832 879 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 PWP2Q15269 919 aaKnown RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 CYP2A13Q16696 494 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 TSHZ3Q63HK5 1081 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 SP5Q6BEB4 398 aaPredicted RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 Q6YL49 198 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 C14orf80Q86SX3 495 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 DAAM2Q86T65 1068 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 CFAP52Q8N1V2 620 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 AOPEPQ8N6M6 819 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 PDPRQ8NCN5 879 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 CPEB3Q8NE35 698 aaKnown RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 POC1BQ8TC44 478 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 NACC2Q96BF6 587 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 MARS2Q96GW9 593 aaKnown RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 ZSWIM1Q9BR11 485 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 TRIM54Q9BYV2 358 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 C22orf23Q9BZE7 217 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 TINAGL1Q9GZM7 467 aaPredicted RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 SIK2Q9H0K1 926 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 BRD9Q9H8M2 597 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 FAM204AQ9H8W3 233 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 RSAD1Q9HA92 442 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 DDX20Q9UHI6 824 aaKnown RBP3.57□□□□□ -1.84
SGMS1-207ENST00000602619 FRMD4BQ9Y2L6 1034 aa3.57□□□□□ -1.84
SGMS1-207ENST00000602619 SPATA31A3Q5VYP0 1347 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 PRAMEF33A0A0G2JMD5 474 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 CAPN8A6NHC0 703 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 H3BUI4 141 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 TPD52L2O43399 206 aaKnown RBP3.56□□□□□ -1.84
SGMS1-207ENST00000602619 PRAMEF10O60809 474 aa3.56□□□□□ -1.84
SGMS1-207ENST00000602619 CDKL5O76039 1030 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms