RNA–Protein interactions for RNA: ENST00000602164.5

USF2-215, Transcript of upstream transcription factor 2, c-fos interacting, human

TSL 3

Gene USF2, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USF2-215	ENST00000602164	CLSTN2	Q9H4D0	955 aa		28.83	■■■□□ 2.21
USF2-215	ENST00000602164	WDR6	Q9NNW5	1121 aa	Known RBP	28.83	■■■□□ 2.21
USF2-215	ENST00000602164	KIAA1468	Q9P260	1216 aa		28.83	■■■□□ 2.21
USF2-215	ENST00000602164	MAFF	Q9ULX9	164 aa		28.83	■■■□□ 2.21
USF2-215	ENST00000602164	HUS1	O60921	280 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	VNN1	O95497	513 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	CCNE1	P24864	410 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	SSTR3	P32745	418 aa	Predicted RBP	28.82	■■■□□ 2.2
USF2-215	ENST00000602164	VAMP7	P51809	220 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	LRRC63	Q05C16	580 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	ADCY1	Q08828	1119 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	SOWAHA	Q2M3V2	549 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	INTS8	Q75QN2	995 aa	Known RBP	28.82	■■■□□ 2.2
USF2-215	ENST00000602164	OSTM1	Q86WC4	334 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	SPATA18	Q8TC71	538 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	KHSRP	Q92945	711 aa	Known RBP eCLIP	28.82	■■■□□ 2.2
USF2-215	ENST00000602164	DHTKD1	Q96HY7	919 aa	Predicted RBP	28.82	■■■□□ 2.2
USF2-215	ENST00000602164	CRISPLD1	Q9H336	500 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	INSL5	Q9Y5Q6	135 aa		28.82	■■■□□ 2.2
USF2-215	ENST00000602164	CLUH	O75153	1309 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	PSMA7	O14818	248 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	IKBKB	O14920	756 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	CCL16	O15467	120 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	PPP1R2	P41236	205 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	MYL6	P60660	151 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	ZACN	Q401N2	412 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	TMEM86A	Q8N2M4	240 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	TRIML1	Q8N9V2	468 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	KBTBD7	Q8WVZ9	684 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	TSG101	Q99816	390 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	CYP4F11	Q9HBI6	524 aa		28.81	■■■□□ 2.2
USF2-215	ENST00000602164	R3HCC1	Q9Y3T6	440 aa	Known RBP	28.81	■■■□□ 2.2
USF2-215	ENST00000602164	MTMR11	A4FU01	709 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	C2CD4D	B7Z1M9	353 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	GABRD	O14764	452 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	CETN3	O15182	167 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	TRIM49	P0CI25	452 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	TRIM49C	P0CI26	452 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	SP100	P23497	879 aa	Predicted RBP	28.8	■■■□□ 2.2
USF2-215	ENST00000602164	STIM1	Q13586	685 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	DPH6	Q7L8W6	267 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	PGLYRP2	Q96PD5	576 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	VRTN	Q9H8Y1	702 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	UST	Q9Y2C2	406 aa		28.8	■■■□□ 2.2
USF2-215	ENST00000602164	DOCK6	Q96HP0	2047 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	PRRG1	O14668	218 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	ELF1	P32519	619 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	FKBP3	Q00688	224 aa	Known RBP	28.79	■■■□□ 2.2
USF2-215	ENST00000602164	PPP3CA	Q08209	521 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	BIRC3	Q13489	604 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	TTI2	Q6NXR4	508 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	FOXR2	Q6PJQ5	311 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	SV2A	Q7L0J3	742 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	LRRTM3	Q86VH5	581 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	ADGRF2	Q8IZF7	708 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	THEM5	Q8N1Q8	247 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	DUSP9	Q99956	384 aa	Known RBP	28.79	■■■□□ 2.2
USF2-215	ENST00000602164	PIDD1	Q9HB75	910 aa		28.79	■■■□□ 2.2
USF2-215	ENST00000602164	NOTCH4	Q99466	2003 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	SLC16A3	O15427	465 aa	Known RBP	28.78	■■■□□ 2.2
USF2-215	ENST00000602164	N4BP1	O75113	896 aa	Known RBP	28.78	■■■□□ 2.2
USF2-215	ENST00000602164	XYLB	O75191	536 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	ATIC	P31939	592 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	TRPC3	Q13507	836 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	NCOA4	Q13772	614 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	GRASP	Q7Z6J2	395 aa	Predicted RBP	28.78	■■■□□ 2.2
USF2-215	ENST00000602164	PKMYT1	Q99640	499 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	NR2E1	Q9Y466	385 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	YIPF1	Q9Y548	306 aa		28.78	■■■□□ 2.2
USF2-215	ENST00000602164	HCRT	O43612	131 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	PHACTR2	O75167	634 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	KRT13	P13646	458 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	NTHL1	P78549	312 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	SLC39A12	Q504Y0	691 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	KLHL10	Q6JEL2	608 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	RNF135	Q8IUD6	432 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	TTC9B	Q8N6N2	239 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	ATAD1	Q8NBU5	361 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	NELFB	Q8WX92	580 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	SYAP1	Q96A49	352 aa	Predicted RBP	28.77	■■■□□ 2.2
USF2-215	ENST00000602164	HCFC1R1	Q9NWW0	138 aa		28.77	■■■□□ 2.2
USF2-215	ENST00000602164	DDX43	Q9NXZ2	648 aa	Known RBP	28.77	■■■□□ 2.2
USF2-215	ENST00000602164	DNMT3B	Q9UBC3	853 aa	Known RBP	28.77	■■■□□ 2.2
USF2-215	ENST00000602164	EPB41	P11171	864 aa	Known RBP	28.76	■■■□□ 2.19
USF2-215	ENST00000602164	WARS	P23381	471 aa	Known RBP	28.76	■■■□□ 2.19
USF2-215	ENST00000602164	WDR72	Q3MJ13	1102 aa		28.76	■■■□□ 2.19
USF2-215	ENST00000602164	GPT2	Q8TD30	523 aa		28.76	■■■□□ 2.19
USF2-215	ENST00000602164	ACBD6	Q9BR61	282 aa		28.76	■■■□□ 2.19
USF2-215	ENST00000602164	TMLHE	Q9NVH6	421 aa		28.76	■■■□□ 2.19
USF2-215	ENST00000602164	CTNND2	Q9UQB3	1225 aa		28.76	■■■□□ 2.19
USF2-215	ENST00000602164	NME7	Q9Y5B8	376 aa		28.76	■■■□□ 2.19
USF2-215	ENST00000602164	DOCK8	Q8NF50	2099 aa		28.75	■■■□□ 2.19
USF2-215	ENST00000602164	LRG1	P02750	347 aa		28.75	■■■□□ 2.19
USF2-215	ENST00000602164	ACAT1	P24752	427 aa	Known RBP	28.75	■■■□□ 2.19
USF2-215	ENST00000602164	GCLM	P48507	274 aa		28.75	■■■□□ 2.19
USF2-215	ENST00000602164	LHX1	P48742	406 aa		28.75	■■■□□ 2.19
USF2-215	ENST00000602164	DUSP4	Q13115	394 aa		28.75	■■■□□ 2.19
USF2-215	ENST00000602164	INTS6L	Q5JSJ4	861 aa	Known RBP	28.75	■■■□□ 2.19
USF2-215	ENST00000602164	TDRD5	Q8NAT2	981 aa	Known RBP	28.75	■■■□□ 2.19
USF2-215	ENST00000602164	ELMO3	Q96BJ8	720 aa		28.75	■■■□□ 2.19

Retrieved 100 of 20,778 RNA–protein pairs in 38 ms