RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 SLU7O95391 586 aaKnown RBP18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 VDRP11473 427 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 CD19P15391 556 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 PRLRP16471 622 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 NDST1P52848 882 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 FAM189BP81408 668 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 PHF13Q86YI8 300 aaPredicted RBP18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 SYCE1Q8N0S2 351 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 TMEM35BQ8NCS4 154 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 VCPIP1Q96JH7 1222 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 ZSWIM1Q9BR11 485 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 NT5C1AQ9BXI3 368 aa18.79■□□□□ 0.6
SHKBP1-224ENST00000600718 DCDC2CA8MYV0 355 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 C9IYK1 514 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 FAM163BP0C2L3 166 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 LILRA4P59901 499 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 SLFN11Q7Z7L1 901 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 PASD1Q8IV76 773 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 LRRC57Q8N9N7 239 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 ZNF653Q96CK0 615 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 HEXIM2Q96MH2 286 aaKnown RBP18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 TOX2Q96NM4 488 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 TWNKQ96RR1 684 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 LHX5Q9H2C1 402 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 OSGEPQ9NPF4 335 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 CTTNBP2NLQ9P2B4 639 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 CEP83Q9Y592 693 aa18.78■□□□□ 0.6
SHKBP1-224ENST00000600718 SPTLC1O15269 473 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 MTA2O94776 668 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 CDH5P33151 784 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 SCNN1GP51170 649 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 ATN1P54259 1190 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 SOWAHAQ2M3V2 549 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 MEI1Q5TIA1 1274 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 C1orf53Q5VUE5 145 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 DPH6Q7L8W6 267 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 LIMS2Q7Z4I7 341 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 UNC93AQ86WB7 457 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 MRPL45Q9BRJ2 306 aaKnown RBP18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 AVENQ9NQS1 362 aaPredicted RBP18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 UVRAGQ9P2Y5 699 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 HMGXB4Q9UGU5 601 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 SNX12Q9UMY4 172 aa18.77■□□□□ 0.6
SHKBP1-224ENST00000600718 INPPL1O15357 1258 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 NBNO60934 754 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 SSTR3P32745 418 aaPredicted RBP18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 CENPFP49454 3210 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 AFF1P51825 1210 aaKnown RBP18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 CNGA2Q16280 664 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 WHAMMP3Q1A5X7 153 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 LIN9Q5TKA1 542 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 MON1BQ7L1V2 547 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 DNAI2Q9GZS0 605 aa18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 CNOT8Q9UFF9 292 aaKnown RBP18.77■□□□□ 0.59
SHKBP1-224ENST00000600718 PCNTO95613 3336 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 FAM170AA1A519 330 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 HUS1O60921 280 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 GRIK3Q13003 919 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 SGO2Q562F6 1265 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 PLEKHG4Q58EX7 1191 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 ANKLE1Q8NAG6 615 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 APPL2Q8NEU8 664 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 DDX27Q96GQ7 796 aaKnown RBP18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 TLR10Q9BXR5 811 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 ADAM22Q9P0K1 906 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 COG5Q9UP83 839 aa18.76■□□□□ 0.59
SHKBP1-224ENST00000600718 PARNO95453 639 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 FTCDO95954 541 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 COL6A1P12109 1028 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 TCP1P17987 556 aaKnown RBP18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 GJA8P48165 433 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 ORC1Q13415 861 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 GPNMBQ14956 572 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 STILQ15468 1287 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 DAAM2Q86T65 1068 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 TOP6BLQ8N6T0 577 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 OR6B3Q8NGW1 331 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 LINC01599Q8WXQ3 324 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 SEPT8Q92599 483 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 APBB2Q92870 758 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 HYOU1Q9Y4L1 999 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 PODXLO00592 558 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 BUB1BO60566 1050 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 IBSPP21815 317 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 PAX3P23760 479 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 LBX1P52954 281 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 FAAP100Q0VG06 881 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 DENND1BQ6P3S1 775 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 WDTC1Q8N5D0 677 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 MNS1Q8NEH6 495 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 NUP85Q9BW27 656 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 CARD6Q9BX69 1037 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 SNX25Q9H3E2 840 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 HIPK3Q9H422 1215 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 ABCB6Q9NP58 842 aa18.75■□□□□ 0.59
SHKBP1-224ENST00000600718 MMP8P22894 467 aa18.74■□□□□ 0.59
SHKBP1-224ENST00000600718 GNL1P36915 607 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms