RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 ZC3H11AO75152 810 aaKnown RBP eCLIP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 ADCYAP1R1P41586 468 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 CELF3Q5SZQ8 465 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 DDX27Q96GQ7 796 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 PRMT1Q99873 361 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 PCYOX1Q9UHG3 505 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 KCNG1Q9UIX4 513 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 DNPEPQ9ULA0 475 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 COL11A1P12107 1806 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 EIF4E1BA6NMX2 242 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 BANF1O75531 89 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 EFNA5P52803 228 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 NFX1Q12986 1120 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 GPS1Q13098 491 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 CD302Q8IX05 232 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 TMEM121Q9BTD3 319 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 DCLK3Q9C098 648 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 VPS37BQ9H9H4 285 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLC24A3Q9HC58 644 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 SCINQ9Y6U3 715 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 ASS1P00966 412 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 OSBPP22059 807 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 ICAM3P32942 547 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 NRLP54845 237 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 TTLL4Q14679 1199 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 SIX1Q15475 284 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 CLUL1Q15846 466 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 KIZQ2M2Z5 673 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 MAP1SQ66K74 1059 aaPredicted RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 SRRM1Q8IYB3 904 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 MORC4Q8TE76 937 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 SNF8Q96H20 258 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 FAM167AQ96KS9 214 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 PLCD4Q9BRC7 762 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 NIFKQ9BYG3 293 aaKnown RBP12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 SAYSD1Q9NPB0 183 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 AGAP1Q9UPQ3 857 aa12.2□□□□□ -0.46
ARHGEF1-220ENST00000600274 M0QYV0 167 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 GPR25O00155 361 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ATG7O95352 703 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 IQCF3P0C7M6 154 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 POLR2BP30876 1174 aaKnown RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 RFC1P35251 1148 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ARSEP51690 589 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 HADHBP55084 474 aaKnown RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ATP11AP98196 1134 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 MXD4Q14582 209 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 TMED2Q15363 201 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ANKMY2Q8IV38 441 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 JOSD2Q8TAC2 188 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 TCP11Q8WWU5 503 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 CDT1Q9H211 546 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 HES2Q9Y543 173 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 BRCA2P51587 3418 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 RBBP6Q7Z6E9 1792 aaKnown RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 LACTBL1A8MY62 500 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 RPS6KA5O75582 802 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 CYP1A1P04798 512 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 OGDHQ02218 1023 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 TFDP1Q14186 410 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 SGSM1Q2NKQ1 1148 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 JADE1Q6IE81 842 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 DPY19L2Q6NUT2 758 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 MPZL3Q6UWV2 235 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ARMCX2Q7L311 632 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ATL2Q8NHH9 583 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 FAM81BQ96LP2 452 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 METTL5Q9NRN9 209 aaKnown RBP12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 FAM49BQ9NUQ9 324 aa12.19□□□□□ -0.46
ARHGEF1-220ENST00000600274 F5H423 210 aaPredicted RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 FSCN2O14926 492 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 STAG3L1P0CL83 205 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 MYBL1P10243 752 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 KRT3P12035 628 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 FNTAP49354 379 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 EIF3BP55884 814 aaKnown RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLMAPQ14BN4 828 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 TARBP2Q15633 366 aaKnown RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 ZNF677Q86XU0 584 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 WDR49Q8IV35 697 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 ELAC2Q9BQ52 826 aaKnown RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 EPB41L4BQ9H329 900 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 SMARCAD1Q9H4L7 1026 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 PMM2O15305 246 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 NOL9Q5SY16 702 aaKnown RBP12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 TWNKQ96RR1 684 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 IP6K2Q9UHH9 426 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 PPP2R3BQ9Y5P8 575 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 SPAG7O75391 227 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 MTA2O94776 668 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 SLC1A1P43005 524 aa12.18□□□□□ -0.46
ARHGEF1-220ENST00000600274 SMAD1Q15797 465 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms