RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 L1RE1Q9UN81 338 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 STXBP5LQ9Y2K9 1186 aa13.14□□□□□ -0.31
TGFB1-204ENST00000600196 NT5C1B-RDH14C9J2C7 533 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 TULP1O00294 542 aaPredicted RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 TPM1P09493 284 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 MYOGP15173 224 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 SMC1AQ14683 1233 aaKnown RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 NFE2Q16621 373 aaPredicted RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 TPGS2Q68CL5 300 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 DRC7Q8IY82 874 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 ADGRF2Q8IZF7 708 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 UBR7Q8N806 425 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 MRPL43Q8N983 215 aaKnown RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 LNX1Q8TBB1 728 aaPredicted RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 HDAC7Q8WUI4 952 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 SHC3Q92529 594 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 ANP32BQ92688 251 aaKnown RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 TATDN2Q93075 761 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
TGFB1-204ENST00000600196 NT5C1AQ9BXI3 368 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 EMILIN2Q9BXX0 1053 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 SNX25Q9H3E2 840 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 IMPACTQ9P2X3 320 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 DNAJC12Q9UKB3 198 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 SCN1AP35498 2009 aa13.13□□□□□ -0.31
TGFB1-204ENST00000600196 NCK2O43639 380 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 CILPO75339 1184 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 NOL4O94818 638 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 BRCC3P46736 316 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF75DP51815 510 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 TSPY1Q01534 308 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 VARS2Q5ST30 1063 aaKnown RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 ELMSAN1Q6PJG2 1045 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 TMC7Q7Z402 723 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 TMEM173Q86WV6 379 aaPredicted RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 POF1BQ8WVV4 589 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 KBTBD7Q8WVZ9 684 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 MRPL38Q96DV4 380 aaKnown RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 FUBP3Q96I24 572 aaKnown RBP eCLIP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 PCMTD1Q96MG8 357 aaPredicted RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 PI4K2AQ9BTU6 479 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 GANQ9H2C0 597 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 CISHQ9NSE2 258 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 HCSTQ9UBK5 93 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 CAPN11Q9UMQ6 739 aa13.12□□□□□ -0.31
TGFB1-204ENST00000600196 BZW2Q9Y6E2 419 aaKnown RBP13.12□□□□□ -0.31
TGFB1-204ENST00000600196 CXCL14O95715 111 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 ADH1AP07327 375 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 ACO1P21399 889 aaKnown RBP13.11□□□□□ -0.31
TGFB1-204ENST00000600196 TKTP29401 623 aaKnown RBP13.11□□□□□ -0.31
TGFB1-204ENST00000600196 STAT1P42224 750 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 NDUFV1P49821 464 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 JAM2P57087 298 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 ZBED6P86452 979 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 GPR17Q13304 367 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 RAB33AQ14088 237 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 CTXN3Q4LDR2 81 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 SPOPLQ6IQ16 392 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF677Q86XU0 584 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 FAM71AQ8IYT1 594 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 OR6B3Q8NGW1 331 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 SPAG5Q96R06 1193 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 ZCWPW1Q9H0M4 648 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 FAM207AQ9NSI2 230 aaPredicted RBP13.11□□□□□ -0.31
TGFB1-204ENST00000600196 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
TGFB1-204ENST00000600196 AIPL1Q9NZN9 384 aa13.11□□□□□ -0.31
TGFB1-204ENST00000600196 LUC7L2Q9Y383 392 aaKnown RBP13.11□□□□□ -0.31
TGFB1-204ENST00000600196 A8MXQ7 604 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 GOLGA6L6A8MZA4 724 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 ARHGEF15O94989 841 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 VDRP11473 427 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 FERP16591 822 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 ANXA13P27216 316 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
TGFB1-204ENST00000600196 PBX3P40426 434 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF132P52740 706 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
TGFB1-204ENST00000600196 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 PTK2Q05397 1052 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 DRAP1Q14919 205 aaPredicted RBP13.1□□□□□ -0.31
TGFB1-204ENST00000600196 PSMD5Q16401 504 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 INTS6LQ5JSJ4 861 aaKnown RBP13.1□□□□□ -0.31
TGFB1-204ENST00000600196 RTP2Q5QGT7 225 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 ZNF697Q5TEC3 545 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 SCARA3Q6AZY7 606 aa13.1□□□□□ -0.31
TGFB1-204ENST00000600196 IQCEQ6IPM2 695 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms