RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 FNBP1Q96RU3 617 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 CGRRF1Q99675 332 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 RTP3Q9BQQ7 232 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 SMOC2Q9H3U7 446 aa17.94■□□□□ 0.46
USHBP1-208ENST00000598309 R3HCC1Q9Y3T6 440 aaKnown RBP17.94■□□□□ 0.46
USHBP1-208ENST00000598309 GOLGA6L4A6NEF3 574 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 PDXKO00764 312 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 ZNF197O14709 1029 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 EXOC3O60645 756 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 HUS1O60921 280 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 EPHA5P54756 1037 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 KCNB1Q14721 858 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 SLC5A9Q2M3M2 681 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 PRSS36Q5K4E3 855 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 LMBRD2Q68DH5 695 aaPredicted RBP17.93■□□□□ 0.46
USHBP1-208ENST00000598309 MTSS1LQ765P7 747 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 SUGP1Q8IWZ8 645 aaKnown RBP17.93■□□□□ 0.46
USHBP1-208ENST00000598309 PDCL2Q8N4E4 241 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 TOP6BLQ8N6T0 577 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 ZNF512Q96ME7 567 aaPredicted RBP17.93■□□□□ 0.46
USHBP1-208ENST00000598309 TMEM209Q96SK2 561 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 KCTD10Q9H3F6 313 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 DMAC2Q9NW81 257 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 GDE1Q9NZC3 331 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 CEP72Q9P209 647 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 MYO10Q9HD67 2058 aa17.93■□□□□ 0.46
USHBP1-208ENST00000598309 DLATP10515 647 aaKnown RBP17.92■□□□□ 0.46
USHBP1-208ENST00000598309 DUSP4Q13115 394 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 CYP4A22Q5TCH4 519 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 PDZD4Q76G19 769 aaPredicted RBP17.92■□□□□ 0.46
USHBP1-208ENST00000598309 DCP1BQ8IZD4 617 aaKnown RBP17.92■□□□□ 0.46
USHBP1-208ENST00000598309 SLC44A3Q8N4M1 653 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 RDH13Q8NBN7 331 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 ATAD1Q8NBU5 361 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 RSAD2Q8WXG1 361 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 CCDC127Q96BQ5 260 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 KCNH6Q9H252 994 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 CRISPLD1Q9H336 500 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 ASAH2Q9NR71 780 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 RAPGEFL1Q9UHV5 662 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 CIZ1Q9ULV3 898 aaPredicted RBP17.92■□□□□ 0.46
USHBP1-208ENST00000598309 L1RE1Q9UN81 338 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 SNX9Q9Y5X1 595 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 NUMBLQ9Y6R0 609 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 DOCK6Q96HP0 2047 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 NOTCH4Q99466 2003 aa17.92■□□□□ 0.46
USHBP1-208ENST00000598309 SRFP11831 508 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 TNNI1P19237 187 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 ALDH1A3P47895 512 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 TUFMP49411 452 aaKnown RBP17.91■□□□□ 0.46
USHBP1-208ENST00000598309 EPHB3P54753 998 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 TSPY1Q01534 308 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 SLC39A12Q504Y0 691 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 DPH6Q7L8W6 267 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 TRAPPC11Q7Z392 1133 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 FMR1NBQ8N0W7 255 aaPredicted RBP17.91■□□□□ 0.46
USHBP1-208ENST00000598309 SPPL2BQ8TCT7 592 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 HPDLQ96IR7 371 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 ACBD6Q9BR61 282 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 GZF1Q9H116 711 aaPredicted RBP17.91■□□□□ 0.46
USHBP1-208ENST00000598309 ASB3Q9Y575 518 aa17.91■□□□□ 0.46
USHBP1-208ENST00000598309 ZNF318Q5VUA4 2279 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 NR3C1P04150 777 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 CEBPBP17676 345 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 LHX1P48742 406 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 AP3M2P53677 418 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 MYL7Q01449 175 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 FAM160A1Q05DH4 1040 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 NFE2Q16621 373 aaPredicted RBP17.9■□□□□ 0.46
USHBP1-208ENST00000598309 NFIL3Q16649 462 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 SCARA3Q6AZY7 606 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 PARM1Q6UWI2 310 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 LIMS2Q7Z4I7 341 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 ADGRF2Q8IZF7 708 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 GUF1Q8N442 669 aaKnown RBP17.9■□□□□ 0.46
USHBP1-208ENST00000598309 ING5Q8WYH8 240 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 FGF14Q92915 247 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 DNAJC25Q9H1X3 360 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 SLC2A4RGQ9NR83 387 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 DDX43Q9NXZ2 648 aaKnown RBP17.9■□□□□ 0.46
USHBP1-208ENST00000598309 WNT16Q9UBV4 365 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 TRAF3IP3Q9Y228 551 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 TRIOO75962 3097 aa17.9■□□□□ 0.46
USHBP1-208ENST00000598309 GABRDO14764 452 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 NARSO43776 548 aaKnown RBP17.89■□□□□ 0.45
USHBP1-208ENST00000598309 CALUO43852 315 aaPredicted RBP17.89■□□□□ 0.45
USHBP1-208ENST00000598309 PCSK1P29120 753 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 CCR2P41597 374 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 CLDN10P78369 228 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 SNW1Q13573 536 aaKnown RBP17.89■□□□□ 0.45
USHBP1-208ENST00000598309 SOWAHAQ2M3V2 549 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 INTS6LQ5JSJ4 861 aaKnown RBP17.89■□□□□ 0.45
USHBP1-208ENST00000598309 ITIH5Q86UX2 942 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 LRRTM3Q86VH5 581 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 TTC9BQ8N6N2 239 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 ENGASEQ8NFI3 743 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 PSMG2Q969U7 264 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 SLC27A5Q9Y2P5 690 aa17.89■□□□□ 0.45
USHBP1-208ENST00000598309 ZDBF2Q9HCK1 2354 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms