RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 PPP1R2P41236 205 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 VAMP7P51809 220 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 LRRC63Q05C16 580 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 ENPEPQ07075 957 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 ADCY1Q08828 1119 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 GPR17Q13304 367 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 STIM1Q13586 685 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 INTS8Q75QN2 995 aaKnown RBP23.55■■□□□ 1.36
HOMER3-206ENST00000594439 THEM5Q8N1Q8 247 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 TOP6BLQ8N6T0 577 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 EEF2KMTQ96G04 330 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 MKNK1Q9BUB5 465 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 ZCWPW1Q9H0M4 648 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 CYP4F11Q9HBI6 524 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 MAFFQ9ULX9 164 aa23.55■■□□□ 1.36
HOMER3-206ENST00000594439 C5orf42Q9H799 3197 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 IKBKBO14920 756 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 CCL16O15467 120 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 STAU1O95793 577 aaKnown RBP23.54■■□□□ 1.36
HOMER3-206ENST00000594439 ELF1P32519 619 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 MYL6P60660 151 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 TRPC3Q13507 836 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 SOWAHAQ2M3V2 549 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 ZACNQ401N2 412 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 OSTM1Q86WC4 334 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 TMEM86AQ8N2M4 240 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 TRIML1Q8N9V2 468 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 SPATA18Q8TC71 538 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 XYLT2Q9H1B5 865 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 PIDD1Q9HB75 910 aa23.54■■□□□ 1.36
HOMER3-206ENST00000594439 WDR6Q9NNW5 1121 aaKnown RBP23.54■■□□□ 1.36
HOMER3-206ENST00000594439 PRRG1O14668 218 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 PHACTR2O75167 634 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 VNN1O95497 513 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 KRT13P13646 458 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 FKBP3Q00688 224 aaKnown RBP23.53■■□□□ 1.36
HOMER3-206ENST00000594439 BIRC3Q13489 604 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 SV2AQ7L0J3 742 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 DPH6Q7L8W6 267 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 PGLYRP2Q96PD5 576 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 INSL5Q9Y5Q6 135 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 NOTCH4Q99466 2003 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 BDP1A6H8Y1 2624 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 CLUHO75153 1309 aa23.53■■□□□ 1.36
HOMER3-206ENST00000594439 MTMR11A4FU01 709 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 GABRDO14764 452 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 XYLBO75191 536 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 TRIM49P0CI25 452 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 TRIM49CP0CI26 452 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 SP100P23497 879 aaPredicted RBP23.52■■□□□ 1.36
HOMER3-206ENST00000594439 ATICP31939 592 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 KLHL10Q6JEL2 608 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 LRRTM3Q86VH5 581 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 ADGRF2Q8IZF7 708 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 CRISPLD1Q9H336 500 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 VRTNQ9H8Y1 702 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 NR2E1Q9Y466 385 aa23.52■■□□□ 1.36
HOMER3-206ENST00000594439 C2CD4DB7Z1M9 353 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 SLC16A3O15427 465 aaKnown RBP23.51■■□□□ 1.35
HOMER3-206ENST00000594439 EPB41P11171 864 aaKnown RBP23.51■■□□□ 1.35
HOMER3-206ENST00000594439 PPP3CAQ08209 521 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 NCOA4Q13772 614 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 SLC39A12Q504Y0 691 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 TTI2Q6NXR4 508 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 FOXR2Q6PJQ5 311 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 KBTBD7Q8WVZ9 684 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 NELFBQ8WX92 580 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 KHSRPQ92945 711 aaKnown RBP eCLIP23.51■■□□□ 1.35
HOMER3-206ENST00000594439 SYAP1Q96A49 352 aaPredicted RBP23.51■■□□□ 1.35
HOMER3-206ENST00000594439 DUSP9Q99956 384 aaKnown RBP23.51■■□□□ 1.35
HOMER3-206ENST00000594439 DDX43Q9NXZ2 648 aaKnown RBP23.51■■□□□ 1.35
HOMER3-206ENST00000594439 USTQ9Y2C2 406 aa23.51■■□□□ 1.35
HOMER3-206ENST00000594439 DOCK8Q8NF50 2099 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 LRG1P02750 347 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 LHX1P48742 406 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 NTHL1P78549 312 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 MYL7Q01449 175 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 DUSP4Q13115 394 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 WDR72Q3MJ13 1102 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 GRASPQ7Z6J2 395 aaPredicted RBP23.5■■□□□ 1.35
HOMER3-206ENST00000594439 ATAD1Q8NBU5 361 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 GPT2Q8TD30 523 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 ACBD6Q9BR61 282 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 NUP62CLQ9H1M0 184 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 HCFC1R1Q9NWW0 138 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 DNMT3BQ9UBC3 853 aaKnown RBP23.5■■□□□ 1.35
HOMER3-206ENST00000594439 POLIQ9UNA4 740 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 CTNND2Q9UQB3 1225 aa23.5■■□□□ 1.35
HOMER3-206ENST00000594439 HCRTO43612 131 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 WARSP23381 471 aaKnown RBP23.49■■□□□ 1.35
HOMER3-206ENST00000594439 ACAT1P24752 427 aaKnown RBP23.49■■□□□ 1.35
HOMER3-206ENST00000594439 GCLMP48507 274 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 ZNF699Q32M78 642 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 RNF135Q8IUD6 432 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 DCP1BQ8IZD4 617 aaKnown RBP23.49■■□□□ 1.35
HOMER3-206ENST00000594439 TTC9BQ8N6N2 239 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 TDRD5Q8NAT2 981 aaKnown RBP23.49■■□□□ 1.35
HOMER3-206ENST00000594439 MMS19Q96T76 1030 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 TMLHEQ9NVH6 421 aa23.49■■□□□ 1.35
HOMER3-206ENST00000594439 YIPF1Q9Y548 306 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms