RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GLUD1P00367 558 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 STX17P56962 302 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 NLRP12P59046 1061 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 YWHAHQ04917 246 aaPredicted RBP21.06■□□□□ 0.96
LSM4-203ENST00000593829 TRPC3Q13507 836 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 AAK1Q2M2I8 961 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 ZNF280DQ6N043 979 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 PALB2Q86YC2 1186 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 ATXN2LQ8WWM7 1075 aaKnown RBP21.06■□□□□ 0.96
LSM4-203ENST00000593829 HPDLQ96IR7 371 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 CEP63Q96MT8 703 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 CDY1Q9Y6F8 540 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 XIRP2A4UGR9 3374 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 C4BPAP04003 597 aaKnown RBP21.06■□□□□ 0.96
LSM4-203ENST00000593829 OR1D2P34982 312 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 SCN1AP35498 2009 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 MCCD1P59942 119 aaPredicted RBP21.06■□□□□ 0.96
LSM4-203ENST00000593829 BIRC3Q13489 604 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 CTXN3Q4LDR2 81 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 CREBRFQ8IUR6 639 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.06■□□□□ 0.96
LSM4-203ENST00000593829 CCDC150Q8NCX0 1101 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 RWDD2AQ9UIY3 292 aa21.06■□□□□ 0.96
LSM4-203ENST00000593829 USP27XA6NNY8 438 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 ADAM12O43184 909 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 TBC1D4O60343 1298 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 CST3P01034 146 aaPredicted RBP21.05■□□□□ 0.96
LSM4-203ENST00000593829 CYP11A1P05108 521 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 LEXMQ3ZCV2 418 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 C1orf220Q5T0J3 134 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 TDRD10Q5VZ19 366 aaKnown RBP21.05■□□□□ 0.96
LSM4-203ENST00000593829 OVOS1Q6IE37 1185 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 ANKRD54Q6NXT1 300 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 RSPO2Q6UXX9 243 aaPredicted RBP21.05■□□□□ 0.96
LSM4-203ENST00000593829 FILIP1Q7Z7B0 1213 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 MSLNLQ96KJ4 702 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 OXCT2Q9BYC2 517 aaPredicted RBP21.05■□□□□ 0.96
LSM4-203ENST00000593829 DZANK1Q9NVP4 752 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 GDAP2Q9NXN4 497 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 DPP7Q9UHL4 492 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 FBXL5Q9UKA1 691 aa21.05■□□□□ 0.96
LSM4-203ENST00000593829 TGM5O43548 720 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 SLU7O95391 586 aaKnown RBP21.04■□□□□ 0.96
LSM4-203ENST00000593829 TRIM49P0CI25 452 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 TRIM49CP0CI26 452 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 HOXB8P17481 243 aaPredicted RBP21.04■□□□□ 0.96
LSM4-203ENST00000593829 MRPS5P82675 430 aaKnown RBP21.04■□□□□ 0.96
LSM4-203ENST00000593829 RAB33AQ14088 237 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 SLC8B1Q6J4K2 584 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 LILRA6Q6PI73 481 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 ELMSAN1Q6PJG2 1045 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 METTL23Q86XA0 190 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 L2HGDHQ9H9P8 463 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 DACH1Q9UI36 760 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 CD207Q9UJ71 328 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 SNX9Q9Y5X1 595 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 HUS1O60921 280 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 ARID5BQ14865 1188 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 DPCR1Q3MIW9 517 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 ZACNQ401N2 412 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 KRT222Q8N1A0 295 aa21.04■□□□□ 0.96
LSM4-203ENST00000593829 ARMCX3Q9UH62 379 aaPredicted RBP21.04■□□□□ 0.96
LSM4-203ENST00000593829 ATICP31939 592 aa21.03■□□□□ 0.96
LSM4-203ENST00000593829 CLUL1Q15846 466 aa21.03■□□□□ 0.96
LSM4-203ENST00000593829 WSCD1Q658N2 575 aa21.03■□□□□ 0.96
LSM4-203ENST00000593829 SV2AQ7L0J3 742 aa21.03■□□□□ 0.96
LSM4-203ENST00000593829 HDAC7Q8WUI4 952 aa21.03■□□□□ 0.96
LSM4-203ENST00000593829 METTL14Q9HCE5 456 aaKnown RBP21.03■□□□□ 0.96
LSM4-203ENST00000593829 MAN1C1Q9NR34 630 aa21.03■□□□□ 0.96
LSM4-203ENST00000593829 STX10O60499 249 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 FGFR1OPO95684 399 aaKnown RBP21.02■□□□□ 0.96
LSM4-203ENST00000593829 SPATA31D3P0C874 917 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 GTF2H1P32780 548 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 GCLMP48507 274 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 MYL6P60660 151 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 PPP3CAQ08209 521 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 NCOA4Q13772 614 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 C15orf39Q6ZRI6 1047 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 SPATA31D4Q6ZUB0 917 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 FRMD5Q7Z6J6 570 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 PLEKHA4Q9H4M7 779 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 BRWD1Q9NSI6 2320 aa21.02■□□□□ 0.96
LSM4-203ENST00000593829 OR6C75A6NL08 312 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 STAU1O95793 577 aaKnown RBP21.02■□□□□ 0.95
LSM4-203ENST00000593829 ARPP19P56211 112 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 NAA30Q147X3 362 aaPredicted RBP21.02■□□□□ 0.95
LSM4-203ENST00000593829 PUS10Q3MIT2 529 aaKnown RBP21.02■□□□□ 0.95
LSM4-203ENST00000593829 CCDC40Q4G0X9 1142 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 TCERG1LQ5VWI1 586 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 SYCE2Q6PIF2 218 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 THEM5Q8N1Q8 247 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 TMEM86AQ8N2M4 240 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 AOPEPQ8N6M6 819 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 TOP6BLQ8N6T0 577 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 KREMEN2Q8NCW0 462 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.02■□□□□ 0.95
LSM4-203ENST00000593829 ASB2Q96Q27 587 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 SRRTQ9BXP5 876 aaKnown RBP21.02■□□□□ 0.95
LSM4-203ENST00000593829 TMEM8AQ9HCN3 771 aa21.02■□□□□ 0.95
LSM4-203ENST00000593829 L1RE1Q9UN81 338 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms