RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 MAMSTRQ6ZN01 415 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 TPRG1Q6ZUI0 275 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 PDILTQ8N807 584 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 BEST2Q8NFU1 509 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 NETO1Q8TDF5 533 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 POMGNT1Q8WZA1 660 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 FAM212AQ96EL1 285 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
H3F3B-213ENST00000593254 TBC1D7Q9P0N9 293 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
H3F3B-213ENST00000593254 AFF4Q9UHB7 1163 aaKnown RBP14.3□□□□□ -0.12
H3F3B-213ENST00000593254 MAFFQ9ULX9 164 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 INSL5Q9Y5Q6 135 aa14.3□□□□□ -0.12
H3F3B-213ENST00000593254 FASNP49327 2511 aaKnown RBP14.29□□□□□ -0.12
H3F3B-213ENST00000593254 ANO9A1A5B4 782 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 PIRO00625 290 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 LRP3O75074 770 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 GCNT3O95395 438 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 LRG1P02750 347 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 RHOP08100 348 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-213ENST00000593254 TYMPP19971 482 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 PAX3P23760 479 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 ALCAMQ13740 583 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 E2F4Q16254 413 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 SLC5A9Q2M3M2 681 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 C9orf57Q5W0N0 161 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 ZNF852Q6ZMS4 543 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 NPAS3Q8IXF0 933 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 OXCT2Q9BYC2 517 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-213ENST00000593254 FGFBP2Q9BYJ0 223 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 TNMDQ9H2S6 317 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 PANK4Q9NVE7 773 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
H3F3B-213ENST00000593254 TIMM13Q9Y5L4 95 aaPredicted RBP14.29□□□□□ -0.12
H3F3B-213ENST00000593254 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.29□□□□□ -0.12
H3F3B-213ENST00000593254 CUTAO60888 179 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 ECI2O75521 394 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 F13A1P00488 732 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 HSP90AA1P07900 732 aaKnown RBP14.28□□□□□ -0.12
H3F3B-213ENST00000593254 CPB1P15086 417 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 PTPN2P17706 415 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 ADCY1Q08828 1119 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 SPEM2Q0P670 501 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 FOXD4L5Q5VV16 416 aaPredicted RBP14.28□□□□□ -0.12
H3F3B-213ENST00000593254 LAIR1Q6GTX8 287 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 SHC4Q6S5L8 630 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 DSTYKQ6XUX3 929 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 RNF19BQ6ZMZ0 732 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 SDK1Q7Z5N4 2213 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 USP37Q86T82 979 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 FOXD4L4Q8WXT5 416 aaPredicted RBP14.28□□□□□ -0.12
H3F3B-213ENST00000593254 SENP8Q96LD8 212 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 CUEDC2Q9H467 287 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 HEBP1Q9NRV9 189 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 KBTBD4Q9NVX7 518 aa14.28□□□□□ -0.12
H3F3B-213ENST00000593254 MRPS17Q9Y2R5 130 aaKnown RBP14.28□□□□□ -0.12
H3F3B-213ENST00000593254 MRPS23Q9Y3D9 190 aaKnown RBP14.28□□□□□ -0.12
H3F3B-213ENST00000593254 COL4A2P08572 1712 aa14.27□□□□□ -0.12
H3F3B-213ENST00000593254 OR6C75A6NL08 312 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 IL18RAPO95256 599 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 VNN2O95498 520 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 ODC1P11926 461 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 GARTP22102 1010 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 NRLP54845 237 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 PRSS36Q5K4E3 855 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 OVOS1Q6IE37 1185 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 NT5DC4Q86YG4 428 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 CCDC65Q8IXS2 484 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 EFCAB13Q8IY85 973 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 CELF5Q8N6W0 485 aaKnown RBP14.27□□□□□ -0.13
H3F3B-213ENST00000593254 ING5Q8WYH8 240 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 PLA2G2FQ9BZM2 168 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 TRIM9Q9C026 710 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 CHRDQ9H2X0 955 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 GDE1Q9NZC3 331 aa14.27□□□□□ -0.13
H3F3B-213ENST00000593254 LDHAP00338 332 aaKnown RBP14.26□□□□□ -0.13
H3F3B-213ENST00000593254 CYP11A1P05108 521 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 RETP07949 1114 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 OR4Q2P0C623 313 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 TWF1Q12792 350 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 GPR17Q13304 367 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 PKP1Q13835 747 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 MYBPC2Q14324 1141 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 CNNM4Q6P4Q7 775 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 BRSK2Q8IWQ3 736 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 IQUBQ8NA54 791 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 ZSWIM2Q8NEG5 633 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 DNASE1L2Q92874 299 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 DHX58Q96C10 678 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 CHAMP1Q96JM3 812 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 CORO1BQ9BR76 489 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 FAM213AQ9BRX8 229 aa14.26□□□□□ -0.13
H3F3B-213ENST00000593254 IER2Q9BTL4 223 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms