RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 PMM2O15305 246 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 TGM5O43548 720 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 HCRTO43612 131 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 TBX10O75333 385 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 AFPP02771 609 aaKnown RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 OR4Q2P0C623 313 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 SPATA31D3P0C874 917 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 WARSP23381 471 aaKnown RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 ASPAP45381 313 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 MTIF2P46199 727 aaKnown RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 ARPP19P56211 112 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 TNNC1P63316 161 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 ROR1Q01973 937 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 KCNJ12Q14500 433 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 SKIV2LQ15477 1246 aaKnown RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 TCP11X2Q5H9J9 407 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 ZNF667Q5HYK9 610 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 TMEM184AQ6ZMB5 413 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 SPATA31D4Q6ZUB0 917 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 OSTM1Q86WC4 334 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 ADGRF2Q8IZF7 708 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 TMEM86AQ8N2M4 240 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 AOPEPQ8N6M6 819 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 TMEM209Q96SK2 561 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 MMS19Q96T76 1030 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 MRPL45Q9BRJ2 306 aaKnown RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 SDCBP2Q9H190 292 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 SMYD3Q9H7B4 428 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 PRDM6Q9NQX0 595 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 CLDND1Q9NY35 253 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 CLEC1BQ9P126 229 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 MAGEC2Q9UBF1 373 aaPredicted RBP10.66□□□□□ -0.7
TPM4-216ENST00000592822 NME7Q9Y5B8 376 aa10.66□□□□□ -0.7
TPM4-216ENST00000592822 FSD2A1L4K1 749 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 WDR27A2RRH5 827 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 P4HA2O15460 535 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 N4BP1O75113 896 aaKnown RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 TACC1O75410 805 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 ABLIM3O94929 683 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 CLSTN1O94985 981 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 GLUD1P00367 558 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 C1RP00736 705 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 FAM163BP0C2L3 166 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 ZNF18P17022 549 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 LMO2P25791 158 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 EEF1GP26641 437 aaKnown RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 RAP1GAPP47736 663 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 ZNF165P49910 485 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 CDH8P55286 799 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 NOP14P78316 857 aaKnown RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 MAN2A1Q16706 1144 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 MIIPQ5JXC2 388 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 SCARA5Q6ZMJ2 495 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 EP400NLQ6ZTU2 488 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 THEM5Q8N1Q8 247 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 LMO3Q8TAP4 145 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 SPATA18Q8TC71 538 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 CASP10Q92851 521 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 TATDN2Q93075 761 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 HLA-CQ95604 372 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 TUBGCP2Q9BSJ2 902 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 OXCT2Q9BYC2 517 aaPredicted RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 BCO2Q9BYV7 579 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 IMPG2Q9BZV3 1241 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 ZCWPW1Q9H0M4 648 aa10.65□□□□□ -0.7
TPM4-216ENST00000592822 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 DDX43Q9NXZ2 648 aaKnown RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 BARX2Q9UMQ3 279 aaPredicted RBP10.65□□□□□ -0.7
TPM4-216ENST00000592822 ATP2C2O75185 946 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 VNN2O95498 520 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 WEE2P0C1S8 567 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 P4HA1P13674 534 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 CPB1P15086 417 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 ACAT1P24752 427 aaKnown RBP10.64□□□□□ -0.71
TPM4-216ENST00000592822 LHX1P48742 406 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 GPR17Q13304 367 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 IQCB1Q15051 598 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 KRT31Q15323 416 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 VWA3BQ502W6 1294 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 TPGS2Q68CL5 300 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 ANKRD54Q6NXT1 300 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 SYCE2Q6PIF2 218 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 RNF19BQ6ZMZ0 732 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 LRRTM3Q86VH5 581 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 KREMEN2Q8NCW0 462 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 CCDC150Q8NCX0 1101 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 EHBP1Q8NDI1 1231 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 ZNF461Q8TAF7 563 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 MSLNLQ96KJ4 702 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 PKMYT1Q99640 499 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 ACBD6Q9BR61 282 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 NIF3L1Q9GZT8 377 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 INTS2Q9H0H0 1204 aaKnown RBP10.64□□□□□ -0.71
TPM4-216ENST00000592822 CBX8Q9HC52 389 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 MAN1C1Q9NR34 630 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 TAB2Q9NYJ8 693 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 FBXW11Q9UKB1 542 aa10.64□□□□□ -0.71
TPM4-216ENST00000592822 H3BQ06 376 aaPredicted RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 SEC24AO95486 1093 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms